Gene : Cagra.1841s0006 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24322:SF547 - ALCOHOL DEHYDROGENASE-LIKE PROTEIN Genomic Order:  6
Name:  ? Cagra.1841s0006 Secondary Identifier:  ? PAC:28901931
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-695 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1841s0006 0.5kb upstream 0.5kb upstream 2721 true Scaffold1841: 41143-43863 Capsella grandiflora
Cagra.1841s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold1841: 43364-43863 Capsella grandiflora
Cagra.1841s0006 0.5kb downstream 0.5kb downstream 2721 true Scaffold1841: 40643-43363 Capsella grandiflora
Cagra.1841s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold1841: 40643-41142 Capsella grandiflora
Cagra.1841s0006 1.0kb upstream 1.0kb upstream 3221 true Scaffold1841: 41143-44363 Capsella grandiflora
Cagra.1841s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold1841: 43364-44363 Capsella grandiflora
Cagra.1841s0006 1.0kb downstream 1.0kb downstream 3221 true Scaffold1841: 40143-43363 Capsella grandiflora
Cagra.1841s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold1841: 40143-41142 Capsella grandiflora
Cagra.1841s0006 2.0kb upstream 2.0kb upstream 4221 true Scaffold1841: 41143-45363 Capsella grandiflora
Cagra.1841s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold1841: 43364-45363 Capsella grandiflora
Cagra.1841s0006 2.0kb downstream 2.0kb downstream 4221 true Scaffold1841: 39143-43363 Capsella grandiflora
Cagra.1841s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold1841: 39143-41142 Capsella grandiflora
Cagra.1841s0006 5.0kb upstream 5.0kb upstream 7221 true Scaffold1841: 41143-48363 Capsella grandiflora
Cagra.1841s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold1841: 43364-48363 Capsella grandiflora
Cagra.1841s0006 5.0kb downstream 5.0kb downstream 7221 true Scaffold1841: 36143-43363 Capsella grandiflora
Cagra.1841s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold1841: 36143-41142 Capsella grandiflora
Cagra.1841s0006 10.0kb upstream 10.0kb upstream 10389 true Scaffold1841: 41143-51531 Capsella grandiflora
Cagra.1841s0006 10.0kb upstream 10.0kb upstream 8168 false Scaffold1841: 43364-51531 Capsella grandiflora
Cagra.1841s0006 10.0kb downstream 10.0kb downstream 12221 true Scaffold1841: 31143-43363 Capsella grandiflora
Cagra.1841s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold1841: 31143-41142 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371567 5261 Brassicaceae View MSA
123800189 5264 Brassicales-Malvales View MSA
124297633 5266 SBM View MSA
124247805 5268 Malvidae View MSA
124068499 5270 Rosid View MSA
123741629 5271 Pentapetalae View MSA
122790439 5272 Eudicot View MSA
122042361 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain