Gene : Cagra.1876s0004 C. grandiflora v1.1
Defline:  (1 of 39) PF04535 - Domain of unknown function (DUF588) (DUF588) Genomic Order:  4
Name:  ? Cagra.1876s0004 Secondary Identifier:  ? PAC:28903301
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1876s0004 0.5kb upstream 0.5kb upstream 2162 true Scaffold1876: 20108-22269 Capsella grandiflora
Cagra.1876s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1876: 21770-22269 Capsella grandiflora
Cagra.1876s0004 0.5kb downstream 0.5kb downstream 2162 true Scaffold1876: 19608-21769 Capsella grandiflora
Cagra.1876s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1876: 19608-20107 Capsella grandiflora
Cagra.1876s0004 1.0kb upstream 1.0kb upstream 2662 true Scaffold1876: 20108-22769 Capsella grandiflora
Cagra.1876s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1876: 21770-22769 Capsella grandiflora
Cagra.1876s0004 1.0kb downstream 1.0kb downstream 2662 true Scaffold1876: 19108-21769 Capsella grandiflora
Cagra.1876s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1876: 19108-20107 Capsella grandiflora
Cagra.1876s0004 2.0kb upstream 2.0kb upstream 3662 true Scaffold1876: 20108-23769 Capsella grandiflora
Cagra.1876s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1876: 21770-23769 Capsella grandiflora
Cagra.1876s0004 2.0kb downstream 2.0kb downstream 3662 true Scaffold1876: 18108-21769 Capsella grandiflora
Cagra.1876s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1876: 18108-20107 Capsella grandiflora
Cagra.1876s0004 5.0kb upstream 5.0kb upstream 6662 true Scaffold1876: 20108-26769 Capsella grandiflora
Cagra.1876s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1876: 21770-26769 Capsella grandiflora
Cagra.1876s0004 5.0kb downstream 5.0kb downstream 6662 true Scaffold1876: 15108-21769 Capsella grandiflora
Cagra.1876s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1876: 15108-20107 Capsella grandiflora
Cagra.1876s0004 10.0kb upstream 10.0kb upstream 11662 true Scaffold1876: 20108-31769 Capsella grandiflora
Cagra.1876s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1876: 21770-31769 Capsella grandiflora
Cagra.1876s0004 10.0kb downstream 10.0kb downstream 11662 true Scaffold1876: 10108-21769 Capsella grandiflora
Cagra.1876s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1876: 10108-20107 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027815 5273 Angiosperm View MSA
122362378 5261 Brassicaceae View MSA
123838090 5264 Brassicales-Malvales View MSA
124337636 5266 SBM View MSA
124238045 5268 Malvidae View MSA
124069291 5270 Rosid View MSA
123747778 5271 Pentapetalae View MSA
122796874 5272 Eudicot View MSA
121349907 5274 Embryophyte View MSA
123381495 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain