Gene : Cagra.1838s0012 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10641:SF654 - TRANSCRIPTION FACTOR RAX1-RELATED Genomic Order:  12
Name:  ? Cagra.1838s0012 Secondary Identifier:  ? PAC:28918384
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1838s0012 0.5kb upstream 0.5kb upstream 1651 true Scaffold1838: 41815-43465 Capsella grandiflora
Cagra.1838s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold1838: 42966-43465 Capsella grandiflora
Cagra.1838s0012 0.5kb downstream 0.5kb downstream 1651 true Scaffold1838: 41315-42965 Capsella grandiflora
Cagra.1838s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold1838: 41315-41814 Capsella grandiflora
Cagra.1838s0012 1.0kb upstream 1.0kb upstream 2151 true Scaffold1838: 41815-43965 Capsella grandiflora
Cagra.1838s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold1838: 42966-43965 Capsella grandiflora
Cagra.1838s0012 1.0kb downstream 1.0kb downstream 2151 true Scaffold1838: 40815-42965 Capsella grandiflora
Cagra.1838s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold1838: 40815-41814 Capsella grandiflora
Cagra.1838s0012 2.0kb upstream 2.0kb upstream 3151 true Scaffold1838: 41815-44965 Capsella grandiflora
Cagra.1838s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold1838: 42966-44965 Capsella grandiflora
Cagra.1838s0012 2.0kb downstream 2.0kb downstream 3151 true Scaffold1838: 39815-42965 Capsella grandiflora
Cagra.1838s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold1838: 39815-41814 Capsella grandiflora
Cagra.1838s0012 5.0kb upstream 5.0kb upstream 6151 true Scaffold1838: 41815-47965 Capsella grandiflora
Cagra.1838s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold1838: 42966-47965 Capsella grandiflora
Cagra.1838s0012 5.0kb downstream 5.0kb downstream 6151 true Scaffold1838: 36815-42965 Capsella grandiflora
Cagra.1838s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold1838: 36815-41814 Capsella grandiflora
Cagra.1838s0012 10.0kb upstream 10.0kb upstream 11151 true Scaffold1838: 41815-52965 Capsella grandiflora
Cagra.1838s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold1838: 42966-52965 Capsella grandiflora
Cagra.1838s0012 10.0kb downstream 10.0kb downstream 11151 true Scaffold1838: 31815-42965 Capsella grandiflora
Cagra.1838s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold1838: 31815-41814 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373239 5261 Brassicaceae View MSA
123838275 5264 Brassicales-Malvales View MSA
124351315 5266 SBM View MSA
124247856 5268 Malvidae View MSA
124071714 5270 Rosid View MSA
123746695 5271 Pentapetalae View MSA
122790538 5272 Eudicot View MSA
122047860 5273 Angiosperm View MSA
121310809 5274 Embryophyte View MSA
123348206 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain