Gene : Cagra.1772s0027 C. grandiflora v1.1
Defline:  (1 of 3) KOG1715 - Mitochondrial/chloroplast ribosomal protein L12 Genomic Order:  27
Name:  ? Cagra.1772s0027 Secondary Identifier:  ? PAC:28906928
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1772s0027 0.5kb upstream 0.5kb upstream 2001 true Scaffold1772: 81780-83780 Capsella grandiflora
Cagra.1772s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold1772: 83281-83780 Capsella grandiflora
Cagra.1772s0027 0.5kb downstream 0.5kb downstream 2001 true Scaffold1772: 81280-83280 Capsella grandiflora
Cagra.1772s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold1772: 81280-81779 Capsella grandiflora
Cagra.1772s0027 1.0kb upstream 1.0kb upstream 2501 true Scaffold1772: 81780-84280 Capsella grandiflora
Cagra.1772s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold1772: 83281-84280 Capsella grandiflora
Cagra.1772s0027 1.0kb downstream 1.0kb downstream 2501 true Scaffold1772: 80780-83280 Capsella grandiflora
Cagra.1772s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold1772: 80780-81779 Capsella grandiflora
Cagra.1772s0027 2.0kb upstream 2.0kb upstream 3501 true Scaffold1772: 81780-85280 Capsella grandiflora
Cagra.1772s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold1772: 83281-85280 Capsella grandiflora
Cagra.1772s0027 2.0kb downstream 2.0kb downstream 3501 true Scaffold1772: 79780-83280 Capsella grandiflora
Cagra.1772s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold1772: 79780-81779 Capsella grandiflora
Cagra.1772s0027 5.0kb upstream 5.0kb upstream 6501 true Scaffold1772: 81780-88280 Capsella grandiflora
Cagra.1772s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold1772: 83281-88280 Capsella grandiflora
Cagra.1772s0027 5.0kb downstream 5.0kb downstream 6501 true Scaffold1772: 76780-83280 Capsella grandiflora
Cagra.1772s0027 5.0kb downstream 5.0kb downstream 5000 false Scaffold1772: 76780-81779 Capsella grandiflora
Cagra.1772s0027 10.0kb upstream 10.0kb upstream 11501 true Scaffold1772: 81780-93280 Capsella grandiflora
Cagra.1772s0027 10.0kb upstream 10.0kb upstream 10000 false Scaffold1772: 83281-93280 Capsella grandiflora
Cagra.1772s0027 10.0kb downstream 10.0kb downstream 11501 true Scaffold1772: 71780-83280 Capsella grandiflora
Cagra.1772s0027 10.0kb downstream 10.0kb downstream 10000 false Scaffold1772: 71780-81779 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368304 5261 Brassicaceae View MSA
123833397 5264 Brassicales-Malvales View MSA
124344859 5266 SBM View MSA
124244566 5268 Malvidae View MSA
124065088 5270 Rosid View MSA
123737507 5271 Pentapetalae View MSA
122792305 5272 Eudicot View MSA
122044886 5273 Angiosperm View MSA
121348936 5274 Embryophyte View MSA
123427211 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain