Gene : Cagra.1796s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10772:SF0 - 20 KDA CHAPERONIN, CHLOROPLASTIC Genomic Order:  5
Name:  ? Cagra.1796s0005 Secondary Identifier:  ? PAC:28894002
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1796s0005 0.5kb upstream 0.5kb upstream 2304 true Scaffold1796: 16453-18756 Capsella grandiflora
Cagra.1796s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold1796: 18257-18756 Capsella grandiflora
Cagra.1796s0005 0.5kb downstream 0.5kb downstream 2304 true Scaffold1796: 15953-18256 Capsella grandiflora
Cagra.1796s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold1796: 15953-16452 Capsella grandiflora
Cagra.1796s0005 1.0kb upstream 1.0kb upstream 2804 true Scaffold1796: 16453-19256 Capsella grandiflora
Cagra.1796s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold1796: 18257-19256 Capsella grandiflora
Cagra.1796s0005 1.0kb downstream 1.0kb downstream 2804 true Scaffold1796: 15453-18256 Capsella grandiflora
Cagra.1796s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold1796: 15453-16452 Capsella grandiflora
Cagra.1796s0005 2.0kb upstream 2.0kb upstream 3804 true Scaffold1796: 16453-20256 Capsella grandiflora
Cagra.1796s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold1796: 18257-20256 Capsella grandiflora
Cagra.1796s0005 2.0kb downstream 2.0kb downstream 3804 true Scaffold1796: 14453-18256 Capsella grandiflora
Cagra.1796s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold1796: 14453-16452 Capsella grandiflora
Cagra.1796s0005 5.0kb upstream 5.0kb upstream 6804 true Scaffold1796: 16453-23256 Capsella grandiflora
Cagra.1796s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold1796: 18257-23256 Capsella grandiflora
Cagra.1796s0005 5.0kb downstream 5.0kb downstream 6804 true Scaffold1796: 11453-18256 Capsella grandiflora
Cagra.1796s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold1796: 11453-16452 Capsella grandiflora
Cagra.1796s0005 10.0kb upstream 10.0kb upstream 11804 true Scaffold1796: 16453-28256 Capsella grandiflora
Cagra.1796s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold1796: 18257-28256 Capsella grandiflora
Cagra.1796s0005 10.0kb downstream 10.0kb downstream 11804 true Scaffold1796: 6453-18256 Capsella grandiflora
Cagra.1796s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold1796: 6453-16452 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364374 5261 Brassicaceae View MSA
123836140 5264 Brassicales-Malvales View MSA
124350160 5266 SBM View MSA
124239782 5268 Malvidae View MSA
124064772 5270 Rosid View MSA
123741725 5271 Pentapetalae View MSA
122790070 5272 Eudicot View MSA
122045141 5273 Angiosperm View MSA
121344791 5274 Embryophyte View MSA
123424643 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain