Gene : Cagra.1742s0035 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23315:SF111 - U-BOX DOMAIN-CONTAINING PROTEIN 14 Genomic Order:  35
Name:  ? Cagra.1742s0035 Secondary Identifier:  ? PAC:28910602
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7511 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1742s0035 0.5kb upstream 0.5kb upstream 3262 true Scaffold1742: 146914-150175 Capsella grandiflora
Cagra.1742s0035 0.5kb upstream 0.5kb upstream 500 false Scaffold1742: 149676-150175 Capsella grandiflora
Cagra.1742s0035 0.5kb downstream 0.5kb downstream 3262 true Scaffold1742: 146414-149675 Capsella grandiflora
Cagra.1742s0035 0.5kb downstream 0.5kb downstream 500 false Scaffold1742: 146414-146913 Capsella grandiflora
Cagra.1742s0035 1.0kb upstream 1.0kb upstream 3762 true Scaffold1742: 146914-150675 Capsella grandiflora
Cagra.1742s0035 1.0kb upstream 1.0kb upstream 1000 false Scaffold1742: 149676-150675 Capsella grandiflora
Cagra.1742s0035 1.0kb downstream 1.0kb downstream 3762 true Scaffold1742: 145914-149675 Capsella grandiflora
Cagra.1742s0035 1.0kb downstream 1.0kb downstream 1000 false Scaffold1742: 145914-146913 Capsella grandiflora
Cagra.1742s0035 2.0kb upstream 2.0kb upstream 4762 true Scaffold1742: 146914-151675 Capsella grandiflora
Cagra.1742s0035 2.0kb upstream 2.0kb upstream 2000 false Scaffold1742: 149676-151675 Capsella grandiflora
Cagra.1742s0035 2.0kb downstream 2.0kb downstream 4762 true Scaffold1742: 144914-149675 Capsella grandiflora
Cagra.1742s0035 2.0kb downstream 2.0kb downstream 2000 false Scaffold1742: 144914-146913 Capsella grandiflora
Cagra.1742s0035 5.0kb upstream 5.0kb upstream 7762 true Scaffold1742: 146914-154675 Capsella grandiflora
Cagra.1742s0035 5.0kb upstream 5.0kb upstream 5000 false Scaffold1742: 149676-154675 Capsella grandiflora
Cagra.1742s0035 5.0kb downstream 5.0kb downstream 7762 true Scaffold1742: 141914-149675 Capsella grandiflora
Cagra.1742s0035 5.0kb downstream 5.0kb downstream 5000 false Scaffold1742: 141914-146913 Capsella grandiflora
Cagra.1742s0035 10.0kb upstream 10.0kb upstream 12762 true Scaffold1742: 146914-159675 Capsella grandiflora
Cagra.1742s0035 10.0kb upstream 10.0kb upstream 10000 false Scaffold1742: 149676-159675 Capsella grandiflora
Cagra.1742s0035 10.0kb downstream 10.0kb downstream 12762 true Scaffold1742: 136914-149675 Capsella grandiflora
Cagra.1742s0035 10.0kb downstream 10.0kb downstream 10000 false Scaffold1742: 136914-146913 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363065 5261 Brassicaceae View MSA
123830304 5264 Brassicales-Malvales View MSA
124337480 5266 SBM View MSA
124237370 5268 Malvidae View MSA
124065418 5270 Rosid View MSA
123739906 5271 Pentapetalae View MSA
122790994 5272 Eudicot View MSA
122042286 5273 Angiosperm View MSA
121349135 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain