Gene : Cagra.1742s0042 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12136//PTHR12136:SF56 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR Genomic Order:  42
Name:  ? Cagra.1742s0042 Secondary Identifier:  ? PAC:28910610
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1742s0042 0.5kb upstream 0.5kb upstream 4095 true Scaffold1742: 179428-183522 Capsella grandiflora
Cagra.1742s0042 0.5kb upstream 0.5kb upstream 500 false Scaffold1742: 183023-183522 Capsella grandiflora
Cagra.1742s0042 0.5kb downstream 0.5kb downstream 4095 true Scaffold1742: 178928-183022 Capsella grandiflora
Cagra.1742s0042 0.5kb downstream 0.5kb downstream 500 false Scaffold1742: 178928-179427 Capsella grandiflora
Cagra.1742s0042 1.0kb upstream 1.0kb upstream 4595 true Scaffold1742: 179428-184022 Capsella grandiflora
Cagra.1742s0042 1.0kb upstream 1.0kb upstream 1000 false Scaffold1742: 183023-184022 Capsella grandiflora
Cagra.1742s0042 1.0kb downstream 1.0kb downstream 4595 true Scaffold1742: 178428-183022 Capsella grandiflora
Cagra.1742s0042 1.0kb downstream 1.0kb downstream 1000 false Scaffold1742: 178428-179427 Capsella grandiflora
Cagra.1742s0042 2.0kb upstream 2.0kb upstream 5595 true Scaffold1742: 179428-185022 Capsella grandiflora
Cagra.1742s0042 2.0kb upstream 2.0kb upstream 2000 false Scaffold1742: 183023-185022 Capsella grandiflora
Cagra.1742s0042 2.0kb downstream 2.0kb downstream 5595 true Scaffold1742: 177428-183022 Capsella grandiflora
Cagra.1742s0042 2.0kb downstream 2.0kb downstream 2000 false Scaffold1742: 177428-179427 Capsella grandiflora
Cagra.1742s0042 5.0kb upstream 5.0kb upstream 8595 true Scaffold1742: 179428-188022 Capsella grandiflora
Cagra.1742s0042 5.0kb upstream 5.0kb upstream 5000 false Scaffold1742: 183023-188022 Capsella grandiflora
Cagra.1742s0042 5.0kb downstream 5.0kb downstream 8595 true Scaffold1742: 174428-183022 Capsella grandiflora
Cagra.1742s0042 5.0kb downstream 5.0kb downstream 5000 false Scaffold1742: 174428-179427 Capsella grandiflora
Cagra.1742s0042 10.0kb upstream 10.0kb upstream 13595 true Scaffold1742: 179428-193022 Capsella grandiflora
Cagra.1742s0042 10.0kb upstream 10.0kb upstream 10000 false Scaffold1742: 183023-193022 Capsella grandiflora
Cagra.1742s0042 10.0kb downstream 10.0kb downstream 13595 true Scaffold1742: 169428-183022 Capsella grandiflora
Cagra.1742s0042 10.0kb downstream 10.0kb downstream 10000 false Scaffold1742: 169428-179427 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375907 5261 Brassicaceae View MSA
123834520 5264 Brassicales-Malvales View MSA
124343177 5266 SBM View MSA
124250814 5268 Malvidae View MSA
124064744 5270 Rosid View MSA
123746336 5271 Pentapetalae View MSA
122790563 5272 Eudicot View MSA
122046452 5273 Angiosperm View MSA
121347989 5274 Embryophyte View MSA
123428121 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain