Gene : Cagra.1742s0039 C. grandiflora v1.1
Defline:  (1 of 1) PTHR20922:SF13 - DNL-TYPE ZINC FINGER PROTEIN Genomic Order:  39
Name:  ? Cagra.1742s0039 Secondary Identifier:  ? PAC:28910611
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1742s0039 0.5kb upstream 0.5kb upstream 2094 true Scaffold1742: 161054-163147 Capsella grandiflora
Cagra.1742s0039 0.5kb upstream 0.5kb upstream 500 false Scaffold1742: 162648-163147 Capsella grandiflora
Cagra.1742s0039 0.5kb downstream 0.5kb downstream 2094 true Scaffold1742: 160554-162647 Capsella grandiflora
Cagra.1742s0039 0.5kb downstream 0.5kb downstream 500 false Scaffold1742: 160554-161053 Capsella grandiflora
Cagra.1742s0039 1.0kb upstream 1.0kb upstream 2594 true Scaffold1742: 161054-163647 Capsella grandiflora
Cagra.1742s0039 1.0kb upstream 1.0kb upstream 1000 false Scaffold1742: 162648-163647 Capsella grandiflora
Cagra.1742s0039 1.0kb downstream 1.0kb downstream 2594 true Scaffold1742: 160054-162647 Capsella grandiflora
Cagra.1742s0039 1.0kb downstream 1.0kb downstream 1000 false Scaffold1742: 160054-161053 Capsella grandiflora
Cagra.1742s0039 2.0kb upstream 2.0kb upstream 3594 true Scaffold1742: 161054-164647 Capsella grandiflora
Cagra.1742s0039 2.0kb upstream 2.0kb upstream 2000 false Scaffold1742: 162648-164647 Capsella grandiflora
Cagra.1742s0039 2.0kb downstream 2.0kb downstream 3594 true Scaffold1742: 159054-162647 Capsella grandiflora
Cagra.1742s0039 2.0kb downstream 2.0kb downstream 2000 false Scaffold1742: 159054-161053 Capsella grandiflora
Cagra.1742s0039 5.0kb upstream 5.0kb upstream 6594 true Scaffold1742: 161054-167647 Capsella grandiflora
Cagra.1742s0039 5.0kb upstream 5.0kb upstream 5000 false Scaffold1742: 162648-167647 Capsella grandiflora
Cagra.1742s0039 5.0kb downstream 5.0kb downstream 6594 true Scaffold1742: 156054-162647 Capsella grandiflora
Cagra.1742s0039 5.0kb downstream 5.0kb downstream 5000 false Scaffold1742: 156054-161053 Capsella grandiflora
Cagra.1742s0039 10.0kb upstream 10.0kb upstream 11594 true Scaffold1742: 161054-172647 Capsella grandiflora
Cagra.1742s0039 10.0kb upstream 10.0kb upstream 10000 false Scaffold1742: 162648-172647 Capsella grandiflora
Cagra.1742s0039 10.0kb downstream 10.0kb downstream 11594 true Scaffold1742: 151054-162647 Capsella grandiflora
Cagra.1742s0039 10.0kb downstream 10.0kb downstream 10000 false Scaffold1742: 151054-161053 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362376 5261 Brassicaceae View MSA
123828567 5264 Brassicales-Malvales View MSA
124321540 5266 SBM View MSA
124238618 5268 Malvidae View MSA
124064437 5270 Rosid View MSA
123738785 5271 Pentapetalae View MSA
122790651 5272 Eudicot View MSA
122044958 5273 Angiosperm View MSA
121348718 5274 Embryophyte View MSA
123424658 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain