Gene : Cagra.1714s0007 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22999:SF23 - SORTING NEXIN-16 Genomic Order:  7
Name:  ? Cagra.1714s0007 Secondary Identifier:  ? PAC:28895122
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1714s0007 0.5kb upstream 0.5kb upstream 6822 true Scaffold1714: 29528-36349 Capsella grandiflora
Cagra.1714s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold1714: 29528-30027 Capsella grandiflora
Cagra.1714s0007 0.5kb downstream 0.5kb downstream 6822 true Scaffold1714: 30028-36849 Capsella grandiflora
Cagra.1714s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold1714: 36350-36849 Capsella grandiflora
Cagra.1714s0007 1.0kb upstream 1.0kb upstream 7322 true Scaffold1714: 29028-36349 Capsella grandiflora
Cagra.1714s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold1714: 29028-30027 Capsella grandiflora
Cagra.1714s0007 1.0kb downstream 1.0kb downstream 7322 true Scaffold1714: 30028-37349 Capsella grandiflora
Cagra.1714s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold1714: 36350-37349 Capsella grandiflora
Cagra.1714s0007 2.0kb upstream 2.0kb upstream 8322 true Scaffold1714: 28028-36349 Capsella grandiflora
Cagra.1714s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold1714: 28028-30027 Capsella grandiflora
Cagra.1714s0007 2.0kb downstream 2.0kb downstream 8322 true Scaffold1714: 30028-38349 Capsella grandiflora
Cagra.1714s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold1714: 36350-38349 Capsella grandiflora
Cagra.1714s0007 5.0kb upstream 5.0kb upstream 11322 true Scaffold1714: 25028-36349 Capsella grandiflora
Cagra.1714s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold1714: 25028-30027 Capsella grandiflora
Cagra.1714s0007 5.0kb downstream 5.0kb downstream 11322 true Scaffold1714: 30028-41349 Capsella grandiflora
Cagra.1714s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold1714: 36350-41349 Capsella grandiflora
Cagra.1714s0007 10.0kb upstream 10.0kb upstream 16322 true Scaffold1714: 20028-36349 Capsella grandiflora
Cagra.1714s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold1714: 20028-30027 Capsella grandiflora
Cagra.1714s0007 10.0kb downstream 10.0kb downstream 16322 true Scaffold1714: 30028-46349 Capsella grandiflora
Cagra.1714s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold1714: 36350-46349 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365509 5261 Brassicaceae View MSA
123831697 5264 Brassicales-Malvales View MSA
124347039 5266 SBM View MSA
124254555 5268 Malvidae View MSA
124063177 5270 Rosid View MSA
123744623 5271 Pentapetalae View MSA
122786474 5272 Eudicot View MSA
122049546 5273 Angiosperm View MSA
121349142 5274 Embryophyte View MSA
123426415 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain