Gene : Cagra.1718s0013 C. grandiflora v1.1
Defline:  (1 of 3) PTHR12709:SF3 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 7-RELATED Genomic Order:  13
Name:  ? Cagra.1718s0013 Secondary Identifier:  ? PAC:28896631
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1718s0013 0.5kb upstream 0.5kb upstream 2307 true Scaffold1718: 43431-45737 Capsella grandiflora
Cagra.1718s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold1718: 43431-43930 Capsella grandiflora
Cagra.1718s0013 0.5kb downstream 0.5kb downstream 2307 true Scaffold1718: 43931-46237 Capsella grandiflora
Cagra.1718s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold1718: 45738-46237 Capsella grandiflora
Cagra.1718s0013 1.0kb upstream 1.0kb upstream 2807 true Scaffold1718: 42931-45737 Capsella grandiflora
Cagra.1718s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold1718: 42931-43930 Capsella grandiflora
Cagra.1718s0013 1.0kb downstream 1.0kb downstream 2807 true Scaffold1718: 43931-46737 Capsella grandiflora
Cagra.1718s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold1718: 45738-46737 Capsella grandiflora
Cagra.1718s0013 2.0kb upstream 2.0kb upstream 3807 true Scaffold1718: 41931-45737 Capsella grandiflora
Cagra.1718s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold1718: 41931-43930 Capsella grandiflora
Cagra.1718s0013 2.0kb downstream 2.0kb downstream 3807 true Scaffold1718: 43931-47737 Capsella grandiflora
Cagra.1718s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold1718: 45738-47737 Capsella grandiflora
Cagra.1718s0013 5.0kb upstream 5.0kb upstream 6807 true Scaffold1718: 38931-45737 Capsella grandiflora
Cagra.1718s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold1718: 38931-43930 Capsella grandiflora
Cagra.1718s0013 5.0kb downstream 5.0kb downstream 6807 true Scaffold1718: 43931-50737 Capsella grandiflora
Cagra.1718s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold1718: 45738-50737 Capsella grandiflora
Cagra.1718s0013 10.0kb upstream 10.0kb upstream 11807 true Scaffold1718: 33931-45737 Capsella grandiflora
Cagra.1718s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold1718: 33931-43930 Capsella grandiflora
Cagra.1718s0013 10.0kb downstream 10.0kb downstream 11807 true Scaffold1718: 43931-55737 Capsella grandiflora
Cagra.1718s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold1718: 45738-55737 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370730 5261 Brassicaceae View MSA
123800031 5264 Brassicales-Malvales View MSA
124297492 5266 SBM View MSA
124149362 5268 Malvidae View MSA
124061430 5270 Rosid View MSA
123744822 5271 Pentapetalae View MSA
122793544 5272 Eudicot View MSA
122044713 5273 Angiosperm View MSA
121351673 5274 Embryophyte View MSA
123382271 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain