Protein Family : RNA polymerase Rpb7-like, N-terminal domain 123382271

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  121

121 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
98932 (1 of 1) PTHR12709:SF3 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 7-RELATED S. moellendorffii v1.0 528   scaffold_21: 212423-212950
29838.t000014 (1 of 1) K16253 - DNA-directed RNA polymerase IV and V subunit 7 (NRPD7, NRPE7) R. communis v0.1 531   29838: 82856-83386
Cucsa.383860 (1 of 2) PTHR12709:SF3 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 7-RELATED C. sativus v1.0 2426   scaffold03882: 983778-986203
Cucsa.254900 (1 of 2) PTHR12709:SF3 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 7-RELATED C. sativus v1.0 2471   scaffold02229: 3093517-3095987
orange1.1g030170m.g (1 of 4) PTHR12709:SF3 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 7-RELATED C. sinensis v1.1 2050   scaffold00496: 105899-107948
AT4G14520 (1 of 3) K16253 - DNA-directed RNA polymerase IV and V subunit 7 (NRPD7, NRPE7) A. thaliana TAIR10 1900   Chr4: 8341335-8343234
AT4G14660 (1 of 3) K16253 - DNA-directed RNA polymerase IV and V subunit 7 (NRPD7, NRPE7) A. thaliana TAIR10 NRPE7 1511   Chr4: 8406335-8407845
Thhalv10026282m.g (1 of 4) PTHR12709:SF3 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 7-RELATED E. salsugineum v1.0 800   scaffold_1: 13836412-13837211
Thhalv10026369m.g (1 of 4) PTHR12709:SF3 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 7-RELATED E. salsugineum v1.0 1384   scaffold_1: 13491312-13492695
Thhalv10015358m.g (1 of 4) PTHR12709:SF3 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 7-RELATED E. salsugineum v1.0 615   scaffold_2: 11261781-11262395
Ciclev10006012m.g (1 of 3) PTHR12709:SF3 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 7-RELATED C. clementina v1.0 2026   scaffold_9: 10287533-10289558
Lus10024250.g (1 of 4) PTHR12709:SF3 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 7-RELATED L. usitatissimum v1.0 546   scaffold165: 740720-741265
Lus10023619.g (1 of 4) PTHR12709:SF3 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 7-RELATED L. usitatissimum v1.0 546   scaffold505: 194877-195422
Gorai.009G298700 (1 of 2) PTHR12709:SF3 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 7-RELATED G. raimondii v2.1 2424   Chr09: 26210192-26212615
Gorai.006G246300 (1 of 2) PTHR12709:SF3 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 7-RELATED G. raimondii v2.1 2127   Chr06: 49123853-49125979
Thecc1EG044852 (1 of 4) K16253 - DNA-directed RNA polymerase IV and V subunit 7 (NRPD7, NRPE7) T. cacao v1.1 1037   scaffold_10r: 19820526-19821562
Thecc1EG044843 (1 of 4) K16253 - DNA-directed RNA polymerase IV and V subunit 7 (NRPD7, NRPE7) T. cacao v1.1 2266   scaffold_10r: 19768542-19770807
Thecc1EG044847 (1 of 4) K16253 - DNA-directed RNA polymerase IV and V subunit 7 (NRPD7, NRPE7) T. cacao v1.1 35760   scaffold_10r: 19785504-19821263
Thecc1EG020785 (1 of 4) K16253 - DNA-directed RNA polymerase IV and V subunit 7 (NRPD7, NRPE7) T. cacao v1.1 2841   scaffold_4: 30216191-30219031
Migut.G00425 (1 of 4) PTHR12709:SF3 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 7-RELATED M. guttatus v2.0 1683   scaffold_7: 2760477-2762159
Migut.G00431 (1 of 4) PTHR12709:SF3 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 7-RELATED M. guttatus v2.0 555   scaffold_7: 2783046-2783600
Migut.G00434 (1 of 4) PTHR12709:SF3 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 7-RELATED M. guttatus v2.0 1998   scaffold_7: 2796809-2798806
Araha.14174s0005 (1 of 3) PTHR12709:SF3 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 7-RELATED A. halleri v1.1 788   Scaffold14174: 13130-13917
Araha.71880s0001 (1 of 3) PTHR12709:SF3 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 7-RELATED A. halleri v1.1 804   Scaffold71880: 1-804
Cagra.1718s0013 (1 of 3) PTHR12709:SF3 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 7-RELATED C. grandiflora v1.1 1807   Scaffold1718: 43931-45737
Cagra.3691s0003 (1 of 3) PTHR12709:SF3 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 7-RELATED C. grandiflora v1.1 1514   Scaffold3691: 14791-16304
Glyma.20G204700 (1 of 1) PTHR12709:SF3 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 7-RELATED G. max Wm82.a2.v1 2832   Chr20: 44168148-44170979
Brara.H00774 (1 of 3) PTHR12709:SF3 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 7-RELATED B. rapa FPsc v1.3 1428   A08: 9905882-9907309
Brara.J00892 (1 of 3) PTHR12709:SF3 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 7-RELATED B. rapa FPsc v1.3 1677   A10: 8941890-8943566
Bostr.0597s0064 (1 of 3) PTHR12709:SF3 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 7-RELATED B. stricta v1.2 1976   Scaffold597: 563904-565879

121 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
98932 S. moellendorffii v1.0 123382271 RNA polymerase Rpb7-like, N-terminal domain 1 5275 Viridiplantae
29838.m001644 R. communis v0.1 123382271 RNA polymerase Rpb7-like, N-terminal domain 1 5275 Viridiplantae
Cucsa.383860.1 C. sativus v1.0 123382271 RNA polymerase Rpb7-like, N-terminal domain 2 5275 Viridiplantae
Cucsa.254900.1 C. sativus v1.0 123382271 RNA polymerase Rpb7-like, N-terminal domain 2 5275 Viridiplantae
orange1.1g030170m C. sinensis v1.1 123382271 RNA polymerase Rpb7-like, N-terminal domain 1 5275 Viridiplantae
AT4G14520.1 A. thaliana TAIR10 123382271 RNA polymerase Rpb7-like, N-terminal domain 2 5275 Viridiplantae
AT4G14660.1 A. thaliana TAIR10 123382271 RNA polymerase Rpb7-like, N-terminal domain 2 5275 Viridiplantae
Thhalv10026282m E. salsugineum v1.0 123382271 RNA polymerase Rpb7-like, N-terminal domain 3 5275 Viridiplantae
Thhalv10026369m E. salsugineum v1.0 123382271 RNA polymerase Rpb7-like, N-terminal domain 3 5275 Viridiplantae
Thhalv10015358m E. salsugineum v1.0 123382271 RNA polymerase Rpb7-like, N-terminal domain 3 5275 Viridiplantae
Ciclev10006012m C. clementina v1.0 123382271 RNA polymerase Rpb7-like, N-terminal domain 1 5275 Viridiplantae
Lus10024250 L. usitatissimum v1.0 123382271 RNA polymerase Rpb7-like, N-terminal domain 2 5275 Viridiplantae
Lus10023619 L. usitatissimum v1.0 123382271 RNA polymerase Rpb7-like, N-terminal domain 2 5275 Viridiplantae
Gorai.009G298700.1 G. raimondii v2.1 123382271 RNA polymerase Rpb7-like, N-terminal domain 2 5275 Viridiplantae
Gorai.006G246300.1 G. raimondii v2.1 123382271 RNA polymerase Rpb7-like, N-terminal domain 2 5275 Viridiplantae
Thecc1EG044852t1 T. cacao v1.1 123382271 RNA polymerase Rpb7-like, N-terminal domain 4 5275 Viridiplantae
Thecc1EG044843t1 T. cacao v1.1 123382271 RNA polymerase Rpb7-like, N-terminal domain 4 5275 Viridiplantae
Thecc1EG044847t1 T. cacao v1.1 123382271 RNA polymerase Rpb7-like, N-terminal domain 4 5275 Viridiplantae
Thecc1EG020785t2 T. cacao v1.1 123382271 RNA polymerase Rpb7-like, N-terminal domain 4 5275 Viridiplantae
Migut.G00425.1.p M. guttatus v2.0 123382271 RNA polymerase Rpb7-like, N-terminal domain 3 5275 Viridiplantae
Migut.G00431.1.p M. guttatus v2.0 123382271 RNA polymerase Rpb7-like, N-terminal domain 3 5275 Viridiplantae
Migut.G00434.1.p M. guttatus v2.0 123382271 RNA polymerase Rpb7-like, N-terminal domain 3 5275 Viridiplantae
Araha.14174s0005.1.p A. halleri v1.1 123382271 RNA polymerase Rpb7-like, N-terminal domain 2 5275 Viridiplantae
Araha.71880s0001.1.p A. halleri v1.1 123382271 RNA polymerase Rpb7-like, N-terminal domain 2 5275 Viridiplantae
Cagra.1718s0013.1.p C. grandiflora v1.1 123382271 RNA polymerase Rpb7-like, N-terminal domain 2 5275 Viridiplantae
Cagra.3691s0003.1.p C. grandiflora v1.1 123382271 RNA polymerase Rpb7-like, N-terminal domain 2 5275 Viridiplantae
Glyma.20G204700.1.p G. max Wm82.a2.v1 123382271 RNA polymerase Rpb7-like, N-terminal domain 1 5275 Viridiplantae
Brara.H00774.1.p B. rapa FPsc v1.3 123382271 RNA polymerase Rpb7-like, N-terminal domain 2 5275 Viridiplantae
Brara.J00892.1.p B. rapa FPsc v1.3 123382271 RNA polymerase Rpb7-like, N-terminal domain 2 5275 Viridiplantae
Bostr.0597s0079.1.p B. stricta v1.2 123382271 RNA polymerase Rpb7-like, N-terminal domain 2 5275 Viridiplantae