Gene : Thecc1EG044847 T. cacao v1.1
Defline:  (1 of 4) K16253 - DNA-directed RNA polymerase IV and V subunit 7 (NRPD7, NRPE7) Genomic Order:  1437
Name:  ? Thecc1EG044847 Secondary Identifier:  ? PAC:27443801
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG044847 0.5kb upstream 0.5kb upstream 36260 true scaffold_10r: 19785004-19821263 Theobroma cacao
Thecc1EG044847 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 19785004-19785503 Theobroma cacao
Thecc1EG044847 0.5kb downstream 0.5kb downstream 36260 true scaffold_10r: 19785504-19821763 Theobroma cacao
Thecc1EG044847 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 19821264-19821763 Theobroma cacao
Thecc1EG044847 1.0kb upstream 1.0kb upstream 36760 true scaffold_10r: 19784504-19821263 Theobroma cacao
Thecc1EG044847 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 19784504-19785503 Theobroma cacao
Thecc1EG044847 1.0kb downstream 1.0kb downstream 36760 true scaffold_10r: 19785504-19822263 Theobroma cacao
Thecc1EG044847 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 19821264-19822263 Theobroma cacao
Thecc1EG044847 2.0kb upstream 2.0kb upstream 37760 true scaffold_10r: 19783504-19821263 Theobroma cacao
Thecc1EG044847 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 19783504-19785503 Theobroma cacao
Thecc1EG044847 2.0kb downstream 2.0kb downstream 37760 true scaffold_10r: 19785504-19823263 Theobroma cacao
Thecc1EG044847 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 19821264-19823263 Theobroma cacao
Thecc1EG044847 5.0kb upstream 5.0kb upstream 40760 true scaffold_10r: 19780504-19821263 Theobroma cacao
Thecc1EG044847 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 19780504-19785503 Theobroma cacao
Thecc1EG044847 5.0kb downstream 5.0kb downstream 40760 true scaffold_10r: 19785504-19826263 Theobroma cacao
Thecc1EG044847 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 19821264-19826263 Theobroma cacao
Thecc1EG044847 10.0kb upstream 10.0kb upstream 45760 true scaffold_10r: 19775504-19821263 Theobroma cacao
Thecc1EG044847 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 19775504-19785503 Theobroma cacao
Thecc1EG044847 10.0kb downstream 10.0kb downstream 45760 true scaffold_10r: 19785504-19831263 Theobroma cacao
Thecc1EG044847 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 19821264-19831263 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833499 5264 Brassicales-Malvales View MSA
124339124 5266 SBM View MSA
124250432 5268 Malvidae View MSA
124061430 5270 Rosid View MSA
123744822 5271 Pentapetalae View MSA
122793544 5272 Eudicot View MSA
122044713 5273 Angiosperm View MSA
121351673 5274 Embryophyte View MSA
123382271 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain