Gene : Glyma.20G204700 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR12709:SF3 - DNA-DIRECTED RNA POLYMERASE IV SUBUNIT 7-RELATED Genomic Order:  2047
Name:  ? Glyma.20G204700 Secondary Identifier:  ? PAC:30522934
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G204700 0.5kb upstream 0.5kb upstream 3332 true Chr20: 44168148-44171479 Glycine max
Glyma.20G204700 0.5kb upstream 0.5kb upstream 500 false Chr20: 44170980-44171479 Glycine max
Glyma.20G204700 0.5kb downstream 0.5kb downstream 3332 true Chr20: 44167648-44170979 Glycine max
Glyma.20G204700 0.5kb downstream 0.5kb downstream 500 false Chr20: 44167648-44168147 Glycine max
Glyma.20G204700 1.0kb upstream 1.0kb upstream 3832 true Chr20: 44168148-44171979 Glycine max
Glyma.20G204700 1.0kb upstream 1.0kb upstream 1000 false Chr20: 44170980-44171979 Glycine max
Glyma.20G204700 1.0kb downstream 1.0kb downstream 3832 true Chr20: 44167148-44170979 Glycine max
Glyma.20G204700 1.0kb downstream 1.0kb downstream 1000 false Chr20: 44167148-44168147 Glycine max
Glyma.20G204700 2.0kb upstream 2.0kb upstream 4832 true Chr20: 44168148-44172979 Glycine max
Glyma.20G204700 2.0kb upstream 2.0kb upstream 2000 false Chr20: 44170980-44172979 Glycine max
Glyma.20G204700 2.0kb downstream 2.0kb downstream 4832 true Chr20: 44166148-44170979 Glycine max
Glyma.20G204700 2.0kb downstream 2.0kb downstream 2000 false Chr20: 44166148-44168147 Glycine max
Glyma.20G204700 5.0kb upstream 5.0kb upstream 7832 true Chr20: 44168148-44175979 Glycine max
Glyma.20G204700 5.0kb upstream 5.0kb upstream 5000 false Chr20: 44170980-44175979 Glycine max
Glyma.20G204700 5.0kb downstream 5.0kb downstream 7832 true Chr20: 44163148-44170979 Glycine max
Glyma.20G204700 5.0kb downstream 5.0kb downstream 5000 false Chr20: 44163148-44168147 Glycine max
Glyma.20G204700 10.0kb upstream 10.0kb upstream 12832 true Chr20: 44168148-44180979 Glycine max
Glyma.20G204700 10.0kb upstream 10.0kb upstream 10000 false Chr20: 44170980-44180979 Glycine max
Glyma.20G204700 10.0kb downstream 10.0kb downstream 12832 true Chr20: 44158148-44170979 Glycine max
Glyma.20G204700 10.0kb downstream 10.0kb downstream 10000 false Chr20: 44158148-44168147 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306954 5265 Fabidae View MSA
124061430 5270 Rosid View MSA
123744822 5271 Pentapetalae View MSA
122793544 5272 Eudicot View MSA
122044713 5273 Angiosperm View MSA
121351673 5274 Embryophyte View MSA
123382271 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.979 0.0 48.7766   Low
cufflinks 32.0307 0.0 143.606 High High
cufflinks 12.6108 0.0 64.0679   Low
cufflinks 21.6447 0.0 99.3951 High  
cufflinks 17.1335 0.0 86.9249    
cufflinks 14.003 0.0 73.1287    
cufflinks 35.3385 0.0 158.715 High High
cufflinks 22.926 0.0 104.868 High  
cufflinks 19.3926 0.0 90.4961    
cufflinks 0.981        
cufflinks 0.087       Low
cufflinks 0.946        
cufflinks 0.814        
cufflinks 0.994        
cufflinks 0.321        
cufflinks 1.166        
cufflinks 0.246        
cufflinks 1.32        
cufflinks 1.727       High
cufflinks 1.277        
cufflinks 0.129       Low
cufflinks 1.295        
cufflinks 1.223        
cufflinks 0.119       Low
cufflinks 1.29        
cufflinks 0.245        

0 Strain