Gene : Thecc1EG044843 T. cacao v1.1
Defline:  (1 of 4) K16253 - DNA-directed RNA polymerase IV and V subunit 7 (NRPD7, NRPE7) Genomic Order:  1435
Name:  ? Thecc1EG044843 Secondary Identifier:  ? PAC:27443018
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG044843 0.5kb upstream 0.5kb upstream 2766 true scaffold_10r: 19768042-19770807 Theobroma cacao
Thecc1EG044843 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 19768042-19768541 Theobroma cacao
Thecc1EG044843 0.5kb downstream 0.5kb downstream 2766 true scaffold_10r: 19768542-19771307 Theobroma cacao
Thecc1EG044843 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 19770808-19771307 Theobroma cacao
Thecc1EG044843 1.0kb upstream 1.0kb upstream 3266 true scaffold_10r: 19767542-19770807 Theobroma cacao
Thecc1EG044843 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 19767542-19768541 Theobroma cacao
Thecc1EG044843 1.0kb downstream 1.0kb downstream 3266 true scaffold_10r: 19768542-19771807 Theobroma cacao
Thecc1EG044843 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 19770808-19771807 Theobroma cacao
Thecc1EG044843 2.0kb upstream 2.0kb upstream 4266 true scaffold_10r: 19766542-19770807 Theobroma cacao
Thecc1EG044843 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 19766542-19768541 Theobroma cacao
Thecc1EG044843 2.0kb downstream 2.0kb downstream 4266 true scaffold_10r: 19768542-19772807 Theobroma cacao
Thecc1EG044843 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 19770808-19772807 Theobroma cacao
Thecc1EG044843 5.0kb upstream 5.0kb upstream 7266 true scaffold_10r: 19763542-19770807 Theobroma cacao
Thecc1EG044843 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 19763542-19768541 Theobroma cacao
Thecc1EG044843 5.0kb downstream 5.0kb downstream 7266 true scaffold_10r: 19768542-19775807 Theobroma cacao
Thecc1EG044843 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 19770808-19775807 Theobroma cacao
Thecc1EG044843 10.0kb upstream 10.0kb upstream 12266 true scaffold_10r: 19758542-19770807 Theobroma cacao
Thecc1EG044843 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 19758542-19768541 Theobroma cacao
Thecc1EG044843 10.0kb downstream 10.0kb downstream 12266 true scaffold_10r: 19768542-19780807 Theobroma cacao
Thecc1EG044843 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 19770808-19780807 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833499 5264 Brassicales-Malvales View MSA
124339124 5266 SBM View MSA
124250432 5268 Malvidae View MSA
124061430 5270 Rosid View MSA
123744822 5271 Pentapetalae View MSA
122793544 5272 Eudicot View MSA
122044713 5273 Angiosperm View MSA
121351673 5274 Embryophyte View MSA
123382271 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain