Gene : Cagra.1742s0002 C. grandiflora v1.1
Defline:  (1 of 6) PTHR11614:SF92 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN-RELATED Genomic Order:  2
Name:  ? Cagra.1742s0002 Secondary Identifier:  ? PAC:28910604
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7420 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1742s0002 0.5kb upstream 0.5kb upstream 2224 true Scaffold1742: 4510-6733 Capsella grandiflora
Cagra.1742s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1742: 6234-6733 Capsella grandiflora
Cagra.1742s0002 0.5kb downstream 0.5kb downstream 2224 true Scaffold1742: 4010-6233 Capsella grandiflora
Cagra.1742s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1742: 4010-4509 Capsella grandiflora
Cagra.1742s0002 1.0kb upstream 1.0kb upstream 2724 true Scaffold1742: 4510-7233 Capsella grandiflora
Cagra.1742s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1742: 6234-7233 Capsella grandiflora
Cagra.1742s0002 1.0kb downstream 1.0kb downstream 2724 true Scaffold1742: 3510-6233 Capsella grandiflora
Cagra.1742s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1742: 3510-4509 Capsella grandiflora
Cagra.1742s0002 2.0kb upstream 2.0kb upstream 3724 true Scaffold1742: 4510-8233 Capsella grandiflora
Cagra.1742s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1742: 6234-8233 Capsella grandiflora
Cagra.1742s0002 2.0kb downstream 2.0kb downstream 3724 true Scaffold1742: 2510-6233 Capsella grandiflora
Cagra.1742s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold1742: 2510-4509 Capsella grandiflora
Cagra.1742s0002 5.0kb upstream 5.0kb upstream 6724 true Scaffold1742: 4510-11233 Capsella grandiflora
Cagra.1742s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold1742: 6234-11233 Capsella grandiflora
Cagra.1742s0002 5.0kb downstream 5.0kb downstream 6233 true Scaffold1742: 1-6233 Capsella grandiflora
Cagra.1742s0002 5.0kb downstream 5.0kb downstream 4509 false Scaffold1742: 1-4509 Capsella grandiflora
Cagra.1742s0002 10.0kb upstream 10.0kb upstream 11724 true Scaffold1742: 4510-16233 Capsella grandiflora
Cagra.1742s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold1742: 6234-16233 Capsella grandiflora
Cagra.1742s0002 10.0kb downstream 10.0kb downstream 6233 true Scaffold1742: 1-6233 Capsella grandiflora
Cagra.1742s0002 10.0kb downstream 10.0kb downstream 4509 false Scaffold1742: 1-4509 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374566 5261 Brassicaceae View MSA
123800778 5264 Brassicales-Malvales View MSA
124298149 5266 SBM View MSA
124149866 5268 Malvidae View MSA
124061404 5270 Rosid View MSA
123753493 5271 Pentapetalae View MSA
122796454 5272 Eudicot View MSA
122051494 5273 Angiosperm View MSA
121350082 5274 Embryophyte View MSA
123428617 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain