Gene : Cagra.1742s0031 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21649:SF7 - CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC Genomic Order:  31
Name:  ? Cagra.1742s0031 Secondary Identifier:  ? PAC:28910591
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1742s0031 0.5kb upstream 0.5kb upstream 2015 true Scaffold1742: 128501-130515 Capsella grandiflora
Cagra.1742s0031 0.5kb upstream 0.5kb upstream 500 false Scaffold1742: 128501-129000 Capsella grandiflora
Cagra.1742s0031 0.5kb downstream 0.5kb downstream 2015 true Scaffold1742: 129001-131015 Capsella grandiflora
Cagra.1742s0031 0.5kb downstream 0.5kb downstream 500 false Scaffold1742: 130516-131015 Capsella grandiflora
Cagra.1742s0031 1.0kb upstream 1.0kb upstream 2515 true Scaffold1742: 128001-130515 Capsella grandiflora
Cagra.1742s0031 1.0kb upstream 1.0kb upstream 1000 false Scaffold1742: 128001-129000 Capsella grandiflora
Cagra.1742s0031 1.0kb downstream 1.0kb downstream 2515 true Scaffold1742: 129001-131515 Capsella grandiflora
Cagra.1742s0031 1.0kb downstream 1.0kb downstream 1000 false Scaffold1742: 130516-131515 Capsella grandiflora
Cagra.1742s0031 2.0kb upstream 2.0kb upstream 3515 true Scaffold1742: 127001-130515 Capsella grandiflora
Cagra.1742s0031 2.0kb upstream 2.0kb upstream 2000 false Scaffold1742: 127001-129000 Capsella grandiflora
Cagra.1742s0031 2.0kb downstream 2.0kb downstream 3515 true Scaffold1742: 129001-132515 Capsella grandiflora
Cagra.1742s0031 2.0kb downstream 2.0kb downstream 2000 false Scaffold1742: 130516-132515 Capsella grandiflora
Cagra.1742s0031 5.0kb upstream 5.0kb upstream 6515 true Scaffold1742: 124001-130515 Capsella grandiflora
Cagra.1742s0031 5.0kb upstream 5.0kb upstream 5000 false Scaffold1742: 124001-129000 Capsella grandiflora
Cagra.1742s0031 5.0kb downstream 5.0kb downstream 6515 true Scaffold1742: 129001-135515 Capsella grandiflora
Cagra.1742s0031 5.0kb downstream 5.0kb downstream 5000 false Scaffold1742: 130516-135515 Capsella grandiflora
Cagra.1742s0031 10.0kb upstream 10.0kb upstream 11515 true Scaffold1742: 119001-130515 Capsella grandiflora
Cagra.1742s0031 10.0kb upstream 10.0kb upstream 10000 false Scaffold1742: 119001-129000 Capsella grandiflora
Cagra.1742s0031 10.0kb downstream 10.0kb downstream 11515 true Scaffold1742: 129001-140515 Capsella grandiflora
Cagra.1742s0031 10.0kb downstream 10.0kb downstream 10000 false Scaffold1742: 130516-140515 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374272 5261 Brassicaceae View MSA
123840113 5264 Brassicales-Malvales View MSA
124341032 5266 SBM View MSA
124253562 5268 Malvidae View MSA
124067443 5270 Rosid View MSA
123742778 5271 Pentapetalae View MSA
122793443 5272 Eudicot View MSA
122044861 5273 Angiosperm View MSA
121344658 5274 Embryophyte View MSA
123424228 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain