Gene : Cagra.1696s0010 C. grandiflora v1.1
Defline:  (1 of 13) PF12854//PF13041 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  10
Name:  ? Cagra.1696s0010 Secondary Identifier:  ? PAC:28916081
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1696s0010 0.5kb upstream 0.5kb upstream 2604 true Scaffold1696: 36924-39527 Capsella grandiflora
Cagra.1696s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold1696: 36924-37423 Capsella grandiflora
Cagra.1696s0010 0.5kb downstream 0.5kb downstream 2604 true Scaffold1696: 37424-40027 Capsella grandiflora
Cagra.1696s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold1696: 39528-40027 Capsella grandiflora
Cagra.1696s0010 1.0kb upstream 1.0kb upstream 3104 true Scaffold1696: 36424-39527 Capsella grandiflora
Cagra.1696s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold1696: 36424-37423 Capsella grandiflora
Cagra.1696s0010 1.0kb downstream 1.0kb downstream 3104 true Scaffold1696: 37424-40527 Capsella grandiflora
Cagra.1696s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold1696: 39528-40527 Capsella grandiflora
Cagra.1696s0010 2.0kb upstream 2.0kb upstream 4104 true Scaffold1696: 35424-39527 Capsella grandiflora
Cagra.1696s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold1696: 35424-37423 Capsella grandiflora
Cagra.1696s0010 2.0kb downstream 2.0kb downstream 4104 true Scaffold1696: 37424-41527 Capsella grandiflora
Cagra.1696s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold1696: 39528-41527 Capsella grandiflora
Cagra.1696s0010 5.0kb upstream 5.0kb upstream 7104 true Scaffold1696: 32424-39527 Capsella grandiflora
Cagra.1696s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold1696: 32424-37423 Capsella grandiflora
Cagra.1696s0010 5.0kb downstream 5.0kb downstream 7104 true Scaffold1696: 37424-44527 Capsella grandiflora
Cagra.1696s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold1696: 39528-44527 Capsella grandiflora
Cagra.1696s0010 10.0kb upstream 10.0kb upstream 12104 true Scaffold1696: 27424-39527 Capsella grandiflora
Cagra.1696s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold1696: 27424-37423 Capsella grandiflora
Cagra.1696s0010 10.0kb downstream 10.0kb downstream 12104 true Scaffold1696: 37424-49527 Capsella grandiflora
Cagra.1696s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold1696: 39528-49527 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361091 5261 Brassicaceae View MSA
123834165 5264 Brassicales-Malvales View MSA
124344064 5266 SBM View MSA
124239137 5268 Malvidae View MSA
124073519 5270 Rosid View MSA
123739768 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain