Gene : Cagra.1696s0031 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21235:SF2 - IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE HISHF Genomic Order:  31
Name:  ? Cagra.1696s0031 Secondary Identifier:  ? PAC:28916089
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1696s0031 0.5kb upstream 0.5kb upstream 5013 true Scaffold1696: 103954-108966 Capsella grandiflora
Cagra.1696s0031 0.5kb upstream 0.5kb upstream 500 false Scaffold1696: 103954-104453 Capsella grandiflora
Cagra.1696s0031 0.5kb downstream 0.5kb downstream 5013 true Scaffold1696: 104454-109466 Capsella grandiflora
Cagra.1696s0031 0.5kb downstream 0.5kb downstream 500 false Scaffold1696: 108967-109466 Capsella grandiflora
Cagra.1696s0031 1.0kb upstream 1.0kb upstream 5513 true Scaffold1696: 103454-108966 Capsella grandiflora
Cagra.1696s0031 1.0kb upstream 1.0kb upstream 1000 false Scaffold1696: 103454-104453 Capsella grandiflora
Cagra.1696s0031 1.0kb downstream 1.0kb downstream 5513 true Scaffold1696: 104454-109966 Capsella grandiflora
Cagra.1696s0031 1.0kb downstream 1.0kb downstream 1000 false Scaffold1696: 108967-109966 Capsella grandiflora
Cagra.1696s0031 2.0kb upstream 2.0kb upstream 6513 true Scaffold1696: 102454-108966 Capsella grandiflora
Cagra.1696s0031 2.0kb upstream 2.0kb upstream 2000 false Scaffold1696: 102454-104453 Capsella grandiflora
Cagra.1696s0031 2.0kb downstream 2.0kb downstream 6513 true Scaffold1696: 104454-110966 Capsella grandiflora
Cagra.1696s0031 2.0kb downstream 2.0kb downstream 2000 false Scaffold1696: 108967-110966 Capsella grandiflora
Cagra.1696s0031 5.0kb upstream 5.0kb upstream 9513 true Scaffold1696: 99454-108966 Capsella grandiflora
Cagra.1696s0031 5.0kb upstream 5.0kb upstream 5000 false Scaffold1696: 99454-104453 Capsella grandiflora
Cagra.1696s0031 5.0kb downstream 5.0kb downstream 9513 true Scaffold1696: 104454-113966 Capsella grandiflora
Cagra.1696s0031 5.0kb downstream 5.0kb downstream 5000 false Scaffold1696: 108967-113966 Capsella grandiflora
Cagra.1696s0031 10.0kb upstream 10.0kb upstream 14513 true Scaffold1696: 94454-108966 Capsella grandiflora
Cagra.1696s0031 10.0kb upstream 10.0kb upstream 10000 false Scaffold1696: 94454-104453 Capsella grandiflora
Cagra.1696s0031 10.0kb downstream 10.0kb downstream 14513 true Scaffold1696: 104454-118966 Capsella grandiflora
Cagra.1696s0031 10.0kb downstream 10.0kb downstream 10000 false Scaffold1696: 108967-118966 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375599 5261 Brassicaceae View MSA
123833038 5264 Brassicales-Malvales View MSA
124345279 5266 SBM View MSA
124243114 5268 Malvidae View MSA
124066754 5270 Rosid View MSA
123743623 5271 Pentapetalae View MSA
122792259 5272 Eudicot View MSA
122046043 5273 Angiosperm View MSA
121347063 5274 Embryophyte View MSA
123424776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain