Gene : Cagra.2117s0034 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12300//PTHR12300:SF44 - HVA22-LIKE PROTEINS Genomic Order:  34
Name:  ? Cagra.2117s0034 Secondary Identifier:  ? PAC:28905616
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2117s0034 0.5kb upstream 0.5kb upstream 1592 true Scaffold2117: 120753-122344 Capsella grandiflora
Cagra.2117s0034 0.5kb upstream 0.5kb upstream 500 false Scaffold2117: 121845-122344 Capsella grandiflora
Cagra.2117s0034 0.5kb downstream 0.5kb downstream 1592 true Scaffold2117: 120253-121844 Capsella grandiflora
Cagra.2117s0034 0.5kb downstream 0.5kb downstream 500 false Scaffold2117: 120253-120752 Capsella grandiflora
Cagra.2117s0034 1.0kb upstream 1.0kb upstream 2092 true Scaffold2117: 120753-122844 Capsella grandiflora
Cagra.2117s0034 1.0kb upstream 1.0kb upstream 1000 false Scaffold2117: 121845-122844 Capsella grandiflora
Cagra.2117s0034 1.0kb downstream 1.0kb downstream 2092 true Scaffold2117: 119753-121844 Capsella grandiflora
Cagra.2117s0034 1.0kb downstream 1.0kb downstream 1000 false Scaffold2117: 119753-120752 Capsella grandiflora
Cagra.2117s0034 2.0kb upstream 2.0kb upstream 3092 true Scaffold2117: 120753-123844 Capsella grandiflora
Cagra.2117s0034 2.0kb upstream 2.0kb upstream 2000 false Scaffold2117: 121845-123844 Capsella grandiflora
Cagra.2117s0034 2.0kb downstream 2.0kb downstream 3092 true Scaffold2117: 118753-121844 Capsella grandiflora
Cagra.2117s0034 2.0kb downstream 2.0kb downstream 2000 false Scaffold2117: 118753-120752 Capsella grandiflora
Cagra.2117s0034 5.0kb upstream 5.0kb upstream 6092 true Scaffold2117: 120753-126844 Capsella grandiflora
Cagra.2117s0034 5.0kb upstream 5.0kb upstream 5000 false Scaffold2117: 121845-126844 Capsella grandiflora
Cagra.2117s0034 5.0kb downstream 5.0kb downstream 6092 true Scaffold2117: 115753-121844 Capsella grandiflora
Cagra.2117s0034 5.0kb downstream 5.0kb downstream 5000 false Scaffold2117: 115753-120752 Capsella grandiflora
Cagra.2117s0034 10.0kb upstream 10.0kb upstream 11092 true Scaffold2117: 120753-131844 Capsella grandiflora
Cagra.2117s0034 10.0kb upstream 10.0kb upstream 10000 false Scaffold2117: 121845-131844 Capsella grandiflora
Cagra.2117s0034 10.0kb downstream 10.0kb downstream 11092 true Scaffold2117: 110753-121844 Capsella grandiflora
Cagra.2117s0034 10.0kb downstream 10.0kb downstream 10000 false Scaffold2117: 110753-120752 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372566 5261 Brassicaceae View MSA
123800387 5264 Brassicales-Malvales View MSA
124297803 5266 SBM View MSA
124149604 5268 Malvidae View MSA
123875379 5270 Rosid View MSA
123459207 5271 Pentapetalae View MSA
122494601 5272 Eudicot View MSA
122050664 5273 Angiosperm View MSA
121348530 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain