Gene : Cagra.2117s0039 C. grandiflora v1.1
Genomic Order:  39 Name:  ? Cagra.2117s0039
Secondary Identifier:  ? PAC:28905590
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2117s0039 0.5kb upstream 0.5kb upstream 1939 true Scaffold2117: 148496-150434 Capsella grandiflora
Cagra.2117s0039 0.5kb upstream 0.5kb upstream 500 false Scaffold2117: 149935-150434 Capsella grandiflora
Cagra.2117s0039 0.5kb downstream 0.5kb downstream 1939 true Scaffold2117: 147996-149934 Capsella grandiflora
Cagra.2117s0039 0.5kb downstream 0.5kb downstream 500 false Scaffold2117: 147996-148495 Capsella grandiflora
Cagra.2117s0039 1.0kb upstream 1.0kb upstream 2439 true Scaffold2117: 148496-150934 Capsella grandiflora
Cagra.2117s0039 1.0kb upstream 1.0kb upstream 1000 false Scaffold2117: 149935-150934 Capsella grandiflora
Cagra.2117s0039 1.0kb downstream 1.0kb downstream 2439 true Scaffold2117: 147496-149934 Capsella grandiflora
Cagra.2117s0039 1.0kb downstream 1.0kb downstream 1000 false Scaffold2117: 147496-148495 Capsella grandiflora
Cagra.2117s0039 2.0kb upstream 2.0kb upstream 3439 true Scaffold2117: 148496-151934 Capsella grandiflora
Cagra.2117s0039 2.0kb upstream 2.0kb upstream 2000 false Scaffold2117: 149935-151934 Capsella grandiflora
Cagra.2117s0039 2.0kb downstream 2.0kb downstream 3439 true Scaffold2117: 146496-149934 Capsella grandiflora
Cagra.2117s0039 2.0kb downstream 2.0kb downstream 2000 false Scaffold2117: 146496-148495 Capsella grandiflora
Cagra.2117s0039 5.0kb upstream 5.0kb upstream 6439 true Scaffold2117: 148496-154934 Capsella grandiflora
Cagra.2117s0039 5.0kb upstream 5.0kb upstream 5000 false Scaffold2117: 149935-154934 Capsella grandiflora
Cagra.2117s0039 5.0kb downstream 5.0kb downstream 6439 true Scaffold2117: 143496-149934 Capsella grandiflora
Cagra.2117s0039 5.0kb downstream 5.0kb downstream 5000 false Scaffold2117: 143496-148495 Capsella grandiflora
Cagra.2117s0039 10.0kb upstream 10.0kb upstream 11439 true Scaffold2117: 148496-159934 Capsella grandiflora
Cagra.2117s0039 10.0kb upstream 10.0kb upstream 10000 false Scaffold2117: 149935-159934 Capsella grandiflora
Cagra.2117s0039 10.0kb downstream 10.0kb downstream 11439 true Scaffold2117: 138496-149934 Capsella grandiflora
Cagra.2117s0039 10.0kb downstream 10.0kb downstream 10000 false Scaffold2117: 138496-148495 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370928 5261 Brassicaceae View MSA
123828642 5264 Brassicales-Malvales View MSA
124345103 5266 SBM View MSA
124239910 5268 Malvidae View MSA
124065432 5270 Rosid View MSA
123747574 5271 Pentapetalae View MSA
122789622 5272 Eudicot View MSA
122046156 5273 Angiosperm View MSA
121344204 5274 Embryophyte View MSA
123425750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain