Gene : Cagra.2117s0049 C. grandiflora v1.1
Defline:  (1 of 1) PTHR15852:SF8 - CHAPERONE PROTEIN DNAJ-LIKE PROTEIN Genomic Order:  49
Name:  ? Cagra.2117s0049 Secondary Identifier:  ? PAC:28905615
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2117s0049 0.5kb upstream 0.5kb upstream 2729 true Scaffold2117: 179741-182469 Capsella grandiflora
Cagra.2117s0049 0.5kb upstream 0.5kb upstream 500 false Scaffold2117: 179741-180240 Capsella grandiflora
Cagra.2117s0049 0.5kb downstream 0.5kb downstream 2729 true Scaffold2117: 180241-182969 Capsella grandiflora
Cagra.2117s0049 0.5kb downstream 0.5kb downstream 500 false Scaffold2117: 182470-182969 Capsella grandiflora
Cagra.2117s0049 1.0kb upstream 1.0kb upstream 3229 true Scaffold2117: 179241-182469 Capsella grandiflora
Cagra.2117s0049 1.0kb upstream 1.0kb upstream 1000 false Scaffold2117: 179241-180240 Capsella grandiflora
Cagra.2117s0049 1.0kb downstream 1.0kb downstream 3229 true Scaffold2117: 180241-183469 Capsella grandiflora
Cagra.2117s0049 1.0kb downstream 1.0kb downstream 1000 false Scaffold2117: 182470-183469 Capsella grandiflora
Cagra.2117s0049 2.0kb upstream 2.0kb upstream 4229 true Scaffold2117: 178241-182469 Capsella grandiflora
Cagra.2117s0049 2.0kb upstream 2.0kb upstream 2000 false Scaffold2117: 178241-180240 Capsella grandiflora
Cagra.2117s0049 2.0kb downstream 2.0kb downstream 4229 true Scaffold2117: 180241-184469 Capsella grandiflora
Cagra.2117s0049 2.0kb downstream 2.0kb downstream 2000 false Scaffold2117: 182470-184469 Capsella grandiflora
Cagra.2117s0049 5.0kb upstream 5.0kb upstream 7229 true Scaffold2117: 175241-182469 Capsella grandiflora
Cagra.2117s0049 5.0kb upstream 5.0kb upstream 5000 false Scaffold2117: 175241-180240 Capsella grandiflora
Cagra.2117s0049 5.0kb downstream 5.0kb downstream 7229 true Scaffold2117: 180241-187469 Capsella grandiflora
Cagra.2117s0049 5.0kb downstream 5.0kb downstream 5000 false Scaffold2117: 182470-187469 Capsella grandiflora
Cagra.2117s0049 10.0kb upstream 10.0kb upstream 12229 true Scaffold2117: 170241-182469 Capsella grandiflora
Cagra.2117s0049 10.0kb upstream 10.0kb upstream 10000 false Scaffold2117: 170241-180240 Capsella grandiflora
Cagra.2117s0049 10.0kb downstream 10.0kb downstream 12229 true Scaffold2117: 180241-192469 Capsella grandiflora
Cagra.2117s0049 10.0kb downstream 10.0kb downstream 10000 false Scaffold2117: 182470-192469 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370313 5261 Brassicaceae View MSA
123833876 5264 Brassicales-Malvales View MSA
124338740 5266 SBM View MSA
124237903 5268 Malvidae View MSA
124069527 5270 Rosid View MSA
123737548 5271 Pentapetalae View MSA
122792057 5272 Eudicot View MSA
122048573 5273 Angiosperm View MSA
121345150 5274 Embryophyte View MSA
123426769 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain