Gene : Cagra.2117s0063 C. grandiflora v1.1
Defline:  (1 of 3) 6.3.2.17 - Tetrahydrofolate synthase / Tetrahydrofolylpolyglutamate synthase Genomic Order:  63
Name:  ? Cagra.2117s0063 Secondary Identifier:  ? PAC:28905551
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-2161 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2117s0063 0.5kb upstream 0.5kb upstream 5569 true Scaffold2117: 228381-233949 Capsella grandiflora
Cagra.2117s0063 0.5kb upstream 0.5kb upstream 500 false Scaffold2117: 228381-228880 Capsella grandiflora
Cagra.2117s0063 0.5kb downstream 0.5kb downstream 5569 true Scaffold2117: 228881-234449 Capsella grandiflora
Cagra.2117s0063 0.5kb downstream 0.5kb downstream 500 false Scaffold2117: 233950-234449 Capsella grandiflora
Cagra.2117s0063 1.0kb upstream 1.0kb upstream 6069 true Scaffold2117: 227881-233949 Capsella grandiflora
Cagra.2117s0063 1.0kb upstream 1.0kb upstream 1000 false Scaffold2117: 227881-228880 Capsella grandiflora
Cagra.2117s0063 1.0kb downstream 1.0kb downstream 6069 true Scaffold2117: 228881-234949 Capsella grandiflora
Cagra.2117s0063 1.0kb downstream 1.0kb downstream 1000 false Scaffold2117: 233950-234949 Capsella grandiflora
Cagra.2117s0063 2.0kb upstream 2.0kb upstream 7069 true Scaffold2117: 226881-233949 Capsella grandiflora
Cagra.2117s0063 2.0kb upstream 2.0kb upstream 2000 false Scaffold2117: 226881-228880 Capsella grandiflora
Cagra.2117s0063 2.0kb downstream 2.0kb downstream 7069 true Scaffold2117: 228881-235949 Capsella grandiflora
Cagra.2117s0063 2.0kb downstream 2.0kb downstream 2000 false Scaffold2117: 233950-235949 Capsella grandiflora
Cagra.2117s0063 5.0kb upstream 5.0kb upstream 10069 true Scaffold2117: 223881-233949 Capsella grandiflora
Cagra.2117s0063 5.0kb upstream 5.0kb upstream 5000 false Scaffold2117: 223881-228880 Capsella grandiflora
Cagra.2117s0063 5.0kb downstream 5.0kb downstream 10069 true Scaffold2117: 228881-238949 Capsella grandiflora
Cagra.2117s0063 5.0kb downstream 5.0kb downstream 5000 false Scaffold2117: 233950-238949 Capsella grandiflora
Cagra.2117s0063 10.0kb upstream 10.0kb upstream 15069 true Scaffold2117: 218881-233949 Capsella grandiflora
Cagra.2117s0063 10.0kb upstream 10.0kb upstream 10000 false Scaffold2117: 218881-228880 Capsella grandiflora
Cagra.2117s0063 10.0kb downstream 10.0kb downstream 15069 true Scaffold2117: 228881-243949 Capsella grandiflora
Cagra.2117s0063 10.0kb downstream 10.0kb downstream 10000 false Scaffold2117: 233950-243949 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368398 5261 Brassicaceae View MSA
123799564 5264 Brassicales-Malvales View MSA
124338906 5266 SBM View MSA
124248831 5268 Malvidae View MSA
124068713 5270 Rosid View MSA
123740446 5271 Pentapetalae View MSA
122786147 5272 Eudicot View MSA
122044962 5273 Angiosperm View MSA
121349297 5274 Embryophyte View MSA
123426614 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain