Gene : Cagra.2098s0076 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12910:SF2 - NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 12 Genomic Order:  76
Name:  ? Cagra.2098s0076 Secondary Identifier:  ? PAC:28919545
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-3781 Capsella grandiflora pathologic  
Cgrandiflora PWY-4302 Capsella grandiflora pathologic  
Cgrandiflora PWY-5083 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2098s0076 0.5kb upstream 0.5kb upstream 3106 true Scaffold2098: 260517-263622 Capsella grandiflora
Cagra.2098s0076 0.5kb upstream 0.5kb upstream 500 false Scaffold2098: 260517-261016 Capsella grandiflora
Cagra.2098s0076 0.5kb downstream 0.5kb downstream 3106 true Scaffold2098: 261017-264122 Capsella grandiflora
Cagra.2098s0076 0.5kb downstream 0.5kb downstream 500 false Scaffold2098: 263623-264122 Capsella grandiflora
Cagra.2098s0076 1.0kb upstream 1.0kb upstream 3606 true Scaffold2098: 260017-263622 Capsella grandiflora
Cagra.2098s0076 1.0kb upstream 1.0kb upstream 1000 false Scaffold2098: 260017-261016 Capsella grandiflora
Cagra.2098s0076 1.0kb downstream 1.0kb downstream 3606 true Scaffold2098: 261017-264622 Capsella grandiflora
Cagra.2098s0076 1.0kb downstream 1.0kb downstream 1000 false Scaffold2098: 263623-264622 Capsella grandiflora
Cagra.2098s0076 2.0kb upstream 2.0kb upstream 4606 true Scaffold2098: 259017-263622 Capsella grandiflora
Cagra.2098s0076 2.0kb upstream 2.0kb upstream 2000 false Scaffold2098: 259017-261016 Capsella grandiflora
Cagra.2098s0076 2.0kb downstream 2.0kb downstream 4606 true Scaffold2098: 261017-265622 Capsella grandiflora
Cagra.2098s0076 2.0kb downstream 2.0kb downstream 2000 false Scaffold2098: 263623-265622 Capsella grandiflora
Cagra.2098s0076 5.0kb upstream 5.0kb upstream 7606 true Scaffold2098: 256017-263622 Capsella grandiflora
Cagra.2098s0076 5.0kb upstream 5.0kb upstream 5000 false Scaffold2098: 256017-261016 Capsella grandiflora
Cagra.2098s0076 5.0kb downstream 5.0kb downstream 7606 true Scaffold2098: 261017-268622 Capsella grandiflora
Cagra.2098s0076 5.0kb downstream 5.0kb downstream 5000 false Scaffold2098: 263623-268622 Capsella grandiflora
Cagra.2098s0076 10.0kb upstream 10.0kb upstream 12606 true Scaffold2098: 251017-263622 Capsella grandiflora
Cagra.2098s0076 10.0kb upstream 10.0kb upstream 10000 false Scaffold2098: 251017-261016 Capsella grandiflora
Cagra.2098s0076 10.0kb downstream 10.0kb downstream 12606 true Scaffold2098: 261017-273622 Capsella grandiflora
Cagra.2098s0076 10.0kb downstream 10.0kb downstream 10000 false Scaffold2098: 263623-273622 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361999 5261 Brassicaceae View MSA
123830822 5264 Brassicales-Malvales View MSA
124340873 5266 SBM View MSA
124238715 5268 Malvidae View MSA
124065378 5270 Rosid View MSA
123737211 5271 Pentapetalae View MSA
122787293 5272 Eudicot View MSA
122043638 5273 Angiosperm View MSA
121345011 5274 Embryophyte View MSA
123426349 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain