Gene : Cagra.2104s0024 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10694:SF8 - LYSINE-SPECIFIC DEMETHYLASE LID Genomic Order:  24
Name:  ? Cagra.2104s0024 Secondary Identifier:  ? PAC:28896263
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2104s0024 0.5kb upstream 0.5kb upstream 9220 true Scaffold2104: 79142-88361 Capsella grandiflora
Cagra.2104s0024 0.5kb upstream 0.5kb upstream 500 false Scaffold2104: 79142-79641 Capsella grandiflora
Cagra.2104s0024 0.5kb downstream 0.5kb downstream 9220 true Scaffold2104: 79642-88861 Capsella grandiflora
Cagra.2104s0024 0.5kb downstream 0.5kb downstream 500 false Scaffold2104: 88362-88861 Capsella grandiflora
Cagra.2104s0024 1.0kb upstream 1.0kb upstream 9720 true Scaffold2104: 78642-88361 Capsella grandiflora
Cagra.2104s0024 1.0kb upstream 1.0kb upstream 1000 false Scaffold2104: 78642-79641 Capsella grandiflora
Cagra.2104s0024 1.0kb downstream 1.0kb downstream 9720 true Scaffold2104: 79642-89361 Capsella grandiflora
Cagra.2104s0024 1.0kb downstream 1.0kb downstream 1000 false Scaffold2104: 88362-89361 Capsella grandiflora
Cagra.2104s0024 2.0kb upstream 2.0kb upstream 10720 true Scaffold2104: 77642-88361 Capsella grandiflora
Cagra.2104s0024 2.0kb upstream 2.0kb upstream 2000 false Scaffold2104: 77642-79641 Capsella grandiflora
Cagra.2104s0024 2.0kb downstream 2.0kb downstream 10720 true Scaffold2104: 79642-90361 Capsella grandiflora
Cagra.2104s0024 2.0kb downstream 2.0kb downstream 2000 false Scaffold2104: 88362-90361 Capsella grandiflora
Cagra.2104s0024 5.0kb upstream 5.0kb upstream 13720 true Scaffold2104: 74642-88361 Capsella grandiflora
Cagra.2104s0024 5.0kb upstream 5.0kb upstream 5000 false Scaffold2104: 74642-79641 Capsella grandiflora
Cagra.2104s0024 5.0kb downstream 5.0kb downstream 13720 true Scaffold2104: 79642-93361 Capsella grandiflora
Cagra.2104s0024 5.0kb downstream 5.0kb downstream 5000 false Scaffold2104: 88362-93361 Capsella grandiflora
Cagra.2104s0024 10.0kb upstream 10.0kb upstream 18720 true Scaffold2104: 69642-88361 Capsella grandiflora
Cagra.2104s0024 10.0kb upstream 10.0kb upstream 10000 false Scaffold2104: 69642-79641 Capsella grandiflora
Cagra.2104s0024 10.0kb downstream 10.0kb downstream 18720 true Scaffold2104: 79642-98361 Capsella grandiflora
Cagra.2104s0024 10.0kb downstream 10.0kb downstream 10000 false Scaffold2104: 88362-98361 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373693 5261 Brassicaceae View MSA
123830324 5264 Brassicales-Malvales View MSA
124346374 5266 SBM View MSA
124248029 5268 Malvidae View MSA
124062119 5270 Rosid View MSA
123738333 5271 Pentapetalae View MSA
122792222 5272 Eudicot View MSA
122044842 5273 Angiosperm View MSA
121344507 5274 Embryophyte View MSA
123426516 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain