Gene : Cagra.2104s0027 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11592:SF27 - GLUTATHIONE PEROXIDASE 8-RELATED Genomic Order:  27
Name:  ? Cagra.2104s0027 Secondary Identifier:  ? PAC:28896274
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora DETOX1-PWY-1 Capsella grandiflora pathologic  
Cgrandiflora PWY-4081 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2104s0027 0.5kb upstream 0.5kb upstream 2002 true Scaffold2104: 100431-102432 Capsella grandiflora
Cagra.2104s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold2104: 101933-102432 Capsella grandiflora
Cagra.2104s0027 0.5kb downstream 0.5kb downstream 2002 true Scaffold2104: 99931-101932 Capsella grandiflora
Cagra.2104s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold2104: 99931-100430 Capsella grandiflora
Cagra.2104s0027 1.0kb upstream 1.0kb upstream 2502 true Scaffold2104: 100431-102932 Capsella grandiflora
Cagra.2104s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold2104: 101933-102932 Capsella grandiflora
Cagra.2104s0027 1.0kb downstream 1.0kb downstream 2502 true Scaffold2104: 99431-101932 Capsella grandiflora
Cagra.2104s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold2104: 99431-100430 Capsella grandiflora
Cagra.2104s0027 2.0kb upstream 2.0kb upstream 3502 true Scaffold2104: 100431-103932 Capsella grandiflora
Cagra.2104s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold2104: 101933-103932 Capsella grandiflora
Cagra.2104s0027 2.0kb downstream 2.0kb downstream 3502 true Scaffold2104: 98431-101932 Capsella grandiflora
Cagra.2104s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold2104: 98431-100430 Capsella grandiflora
Cagra.2104s0027 5.0kb upstream 5.0kb upstream 6502 true Scaffold2104: 100431-106932 Capsella grandiflora
Cagra.2104s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold2104: 101933-106932 Capsella grandiflora
Cagra.2104s0027 5.0kb downstream 5.0kb downstream 6502 true Scaffold2104: 95431-101932 Capsella grandiflora
Cagra.2104s0027 5.0kb downstream 5.0kb downstream 5000 false Scaffold2104: 95431-100430 Capsella grandiflora
Cagra.2104s0027 10.0kb upstream 10.0kb upstream 11502 true Scaffold2104: 100431-111932 Capsella grandiflora
Cagra.2104s0027 10.0kb upstream 10.0kb upstream 10000 false Scaffold2104: 101933-111932 Capsella grandiflora
Cagra.2104s0027 10.0kb downstream 10.0kb downstream 11502 true Scaffold2104: 90431-101932 Capsella grandiflora
Cagra.2104s0027 10.0kb downstream 10.0kb downstream 10000 false Scaffold2104: 90431-100430 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366348 5261 Brassicaceae View MSA
123828080 5264 Brassicales-Malvales View MSA
124340471 5266 SBM View MSA
124242823 5268 Malvidae View MSA
124066443 5270 Rosid View MSA
123752336 5271 Pentapetalae View MSA
122792727 5272 Eudicot View MSA
122049273 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain