Gene : Cagra.2097s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12411:SF297 - CYSTEINE PROTEASE Genomic Order:  3
Name:  ? Cagra.2097s0003 Secondary Identifier:  ? PAC:28905507
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2097s0003 0.5kb upstream 0.5kb upstream 1815 true Scaffold2097: 8919-10733 Capsella grandiflora
Cagra.2097s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold2097: 8919-9418 Capsella grandiflora
Cagra.2097s0003 0.5kb downstream 0.5kb downstream 1815 true Scaffold2097: 9419-11233 Capsella grandiflora
Cagra.2097s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold2097: 10734-11233 Capsella grandiflora
Cagra.2097s0003 1.0kb upstream 1.0kb upstream 2315 true Scaffold2097: 8419-10733 Capsella grandiflora
Cagra.2097s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold2097: 8419-9418 Capsella grandiflora
Cagra.2097s0003 1.0kb downstream 1.0kb downstream 2315 true Scaffold2097: 9419-11733 Capsella grandiflora
Cagra.2097s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold2097: 10734-11733 Capsella grandiflora
Cagra.2097s0003 2.0kb upstream 2.0kb upstream 3315 true Scaffold2097: 7419-10733 Capsella grandiflora
Cagra.2097s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold2097: 7419-9418 Capsella grandiflora
Cagra.2097s0003 2.0kb downstream 2.0kb downstream 3315 true Scaffold2097: 9419-12733 Capsella grandiflora
Cagra.2097s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold2097: 10734-12733 Capsella grandiflora
Cagra.2097s0003 5.0kb upstream 5.0kb upstream 6315 true Scaffold2097: 4419-10733 Capsella grandiflora
Cagra.2097s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold2097: 4419-9418 Capsella grandiflora
Cagra.2097s0003 5.0kb downstream 5.0kb downstream 6315 true Scaffold2097: 9419-15733 Capsella grandiflora
Cagra.2097s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold2097: 10734-15733 Capsella grandiflora
Cagra.2097s0003 10.0kb upstream 10.0kb upstream 10733 true Scaffold2097: 1-10733 Capsella grandiflora
Cagra.2097s0003 10.0kb upstream 10.0kb upstream 9418 false Scaffold2097: 1-9418 Capsella grandiflora
Cagra.2097s0003 10.0kb downstream 10.0kb downstream 11315 true Scaffold2097: 9419-20733 Capsella grandiflora
Cagra.2097s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold2097: 10734-20733 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369375 5261 Brassicaceae View MSA
123836594 5264 Brassicales-Malvales View MSA
124348430 5266 SBM View MSA
124254446 5268 Malvidae View MSA
124074647 5270 Rosid View MSA
123752467 5271 Pentapetalae View MSA
122797682 5272 Eudicot View MSA
122051193 5273 Angiosperm View MSA
121348840 5274 Embryophyte View MSA
123426788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain