Gene : Cagra.2098s0036 C. grandiflora v1.1
Defline:  (1 of 3) 3.1.4.3 - Phospholipase C / Lipophosphodiesterase I Genomic Order:  36
Name:  ? Cagra.2098s0036 Secondary Identifier:  ? PAC:28919546
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora LIPASYN-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2098s0036 0.5kb upstream 0.5kb upstream 2474 true Scaffold2098: 132811-135284 Capsella grandiflora
Cagra.2098s0036 0.5kb upstream 0.5kb upstream 500 false Scaffold2098: 132811-133310 Capsella grandiflora
Cagra.2098s0036 0.5kb downstream 0.5kb downstream 2474 true Scaffold2098: 133311-135784 Capsella grandiflora
Cagra.2098s0036 0.5kb downstream 0.5kb downstream 500 false Scaffold2098: 135285-135784 Capsella grandiflora
Cagra.2098s0036 1.0kb upstream 1.0kb upstream 2974 true Scaffold2098: 132311-135284 Capsella grandiflora
Cagra.2098s0036 1.0kb upstream 1.0kb upstream 1000 false Scaffold2098: 132311-133310 Capsella grandiflora
Cagra.2098s0036 1.0kb downstream 1.0kb downstream 2974 true Scaffold2098: 133311-136284 Capsella grandiflora
Cagra.2098s0036 1.0kb downstream 1.0kb downstream 1000 false Scaffold2098: 135285-136284 Capsella grandiflora
Cagra.2098s0036 2.0kb upstream 2.0kb upstream 3974 true Scaffold2098: 131311-135284 Capsella grandiflora
Cagra.2098s0036 2.0kb upstream 2.0kb upstream 2000 false Scaffold2098: 131311-133310 Capsella grandiflora
Cagra.2098s0036 2.0kb downstream 2.0kb downstream 3974 true Scaffold2098: 133311-137284 Capsella grandiflora
Cagra.2098s0036 2.0kb downstream 2.0kb downstream 2000 false Scaffold2098: 135285-137284 Capsella grandiflora
Cagra.2098s0036 5.0kb upstream 5.0kb upstream 6974 true Scaffold2098: 128311-135284 Capsella grandiflora
Cagra.2098s0036 5.0kb upstream 5.0kb upstream 5000 false Scaffold2098: 128311-133310 Capsella grandiflora
Cagra.2098s0036 5.0kb downstream 5.0kb downstream 6974 true Scaffold2098: 133311-140284 Capsella grandiflora
Cagra.2098s0036 5.0kb downstream 5.0kb downstream 5000 false Scaffold2098: 135285-140284 Capsella grandiflora
Cagra.2098s0036 10.0kb upstream 10.0kb upstream 11974 true Scaffold2098: 123311-135284 Capsella grandiflora
Cagra.2098s0036 10.0kb upstream 10.0kb upstream 10000 false Scaffold2098: 123311-133310 Capsella grandiflora
Cagra.2098s0036 10.0kb downstream 10.0kb downstream 11974 true Scaffold2098: 133311-145284 Capsella grandiflora
Cagra.2098s0036 10.0kb downstream 10.0kb downstream 10000 false Scaffold2098: 135285-145284 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365377 5261 Brassicaceae View MSA
123831528 5264 Brassicales-Malvales View MSA
124345260 5266 SBM View MSA
124244843 5268 Malvidae View MSA
124067828 5270 Rosid View MSA
123747461 5271 Pentapetalae View MSA
122786129 5272 Eudicot View MSA
122043766 5273 Angiosperm View MSA
121350885 5274 Embryophyte View MSA
123381922 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain