Gene : Cagra.2007s0031 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10830 - DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KDA SUBUNIT Genomic Order:  31
Name:  ? Cagra.2007s0031 Secondary Identifier:  ? PAC:28908667
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2007s0031 0.5kb upstream 0.5kb upstream 3502 true Scaffold2007: 120691-124192 Capsella grandiflora
Cagra.2007s0031 0.5kb upstream 0.5kb upstream 500 false Scaffold2007: 120691-121190 Capsella grandiflora
Cagra.2007s0031 0.5kb downstream 0.5kb downstream 3502 true Scaffold2007: 121191-124692 Capsella grandiflora
Cagra.2007s0031 0.5kb downstream 0.5kb downstream 500 false Scaffold2007: 124193-124692 Capsella grandiflora
Cagra.2007s0031 1.0kb upstream 1.0kb upstream 4002 true Scaffold2007: 120191-124192 Capsella grandiflora
Cagra.2007s0031 1.0kb upstream 1.0kb upstream 1000 false Scaffold2007: 120191-121190 Capsella grandiflora
Cagra.2007s0031 1.0kb downstream 1.0kb downstream 4002 true Scaffold2007: 121191-125192 Capsella grandiflora
Cagra.2007s0031 1.0kb downstream 1.0kb downstream 1000 false Scaffold2007: 124193-125192 Capsella grandiflora
Cagra.2007s0031 2.0kb upstream 2.0kb upstream 5002 true Scaffold2007: 119191-124192 Capsella grandiflora
Cagra.2007s0031 2.0kb upstream 2.0kb upstream 2000 false Scaffold2007: 119191-121190 Capsella grandiflora
Cagra.2007s0031 2.0kb downstream 2.0kb downstream 5002 true Scaffold2007: 121191-126192 Capsella grandiflora
Cagra.2007s0031 2.0kb downstream 2.0kb downstream 2000 false Scaffold2007: 124193-126192 Capsella grandiflora
Cagra.2007s0031 5.0kb upstream 5.0kb upstream 8002 true Scaffold2007: 116191-124192 Capsella grandiflora
Cagra.2007s0031 5.0kb upstream 5.0kb upstream 5000 false Scaffold2007: 116191-121190 Capsella grandiflora
Cagra.2007s0031 5.0kb downstream 5.0kb downstream 8002 true Scaffold2007: 121191-129192 Capsella grandiflora
Cagra.2007s0031 5.0kb downstream 5.0kb downstream 5000 false Scaffold2007: 124193-129192 Capsella grandiflora
Cagra.2007s0031 10.0kb upstream 10.0kb upstream 13002 true Scaffold2007: 111191-124192 Capsella grandiflora
Cagra.2007s0031 10.0kb upstream 10.0kb upstream 10000 false Scaffold2007: 111191-121190 Capsella grandiflora
Cagra.2007s0031 10.0kb downstream 10.0kb downstream 13002 true Scaffold2007: 121191-134192 Capsella grandiflora
Cagra.2007s0031 10.0kb downstream 10.0kb downstream 10000 false Scaffold2007: 124193-134192 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360352 5261 Brassicaceae View MSA
123840413 5264 Brassicales-Malvales View MSA
124344226 5266 SBM View MSA
124247082 5268 Malvidae View MSA
124068275 5270 Rosid View MSA
123750728 5271 Pentapetalae View MSA
122793398 5272 Eudicot View MSA
122043093 5273 Angiosperm View MSA
121346216 5274 Embryophyte View MSA
123424757 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain