Gene : Cagra.2007s0054 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31451:SF8 - MANNAN ENDO-1,4-BETA-MANNOSIDASE 3-RELATED Genomic Order:  54
Name:  ? Cagra.2007s0054 Secondary Identifier:  ? PAC:28908617
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2007s0054 0.5kb upstream 0.5kb upstream 2482 true Scaffold2007: 196484-198965 Capsella grandiflora
Cagra.2007s0054 0.5kb upstream 0.5kb upstream 500 false Scaffold2007: 196484-196983 Capsella grandiflora
Cagra.2007s0054 0.5kb downstream 0.5kb downstream 2482 true Scaffold2007: 196984-199465 Capsella grandiflora
Cagra.2007s0054 0.5kb downstream 0.5kb downstream 500 false Scaffold2007: 198966-199465 Capsella grandiflora
Cagra.2007s0054 1.0kb upstream 1.0kb upstream 2982 true Scaffold2007: 195984-198965 Capsella grandiflora
Cagra.2007s0054 1.0kb upstream 1.0kb upstream 1000 false Scaffold2007: 195984-196983 Capsella grandiflora
Cagra.2007s0054 1.0kb downstream 1.0kb downstream 2982 true Scaffold2007: 196984-199965 Capsella grandiflora
Cagra.2007s0054 1.0kb downstream 1.0kb downstream 1000 false Scaffold2007: 198966-199965 Capsella grandiflora
Cagra.2007s0054 2.0kb upstream 2.0kb upstream 3982 true Scaffold2007: 194984-198965 Capsella grandiflora
Cagra.2007s0054 2.0kb upstream 2.0kb upstream 2000 false Scaffold2007: 194984-196983 Capsella grandiflora
Cagra.2007s0054 2.0kb downstream 2.0kb downstream 3982 true Scaffold2007: 196984-200965 Capsella grandiflora
Cagra.2007s0054 2.0kb downstream 2.0kb downstream 2000 false Scaffold2007: 198966-200965 Capsella grandiflora
Cagra.2007s0054 5.0kb upstream 5.0kb upstream 6982 true Scaffold2007: 191984-198965 Capsella grandiflora
Cagra.2007s0054 5.0kb upstream 5.0kb upstream 5000 false Scaffold2007: 191984-196983 Capsella grandiflora
Cagra.2007s0054 5.0kb downstream 5.0kb downstream 6982 true Scaffold2007: 196984-203965 Capsella grandiflora
Cagra.2007s0054 5.0kb downstream 5.0kb downstream 5000 false Scaffold2007: 198966-203965 Capsella grandiflora
Cagra.2007s0054 10.0kb upstream 10.0kb upstream 11982 true Scaffold2007: 186984-198965 Capsella grandiflora
Cagra.2007s0054 10.0kb upstream 10.0kb upstream 10000 false Scaffold2007: 186984-196983 Capsella grandiflora
Cagra.2007s0054 10.0kb downstream 10.0kb downstream 11982 true Scaffold2007: 196984-208965 Capsella grandiflora
Cagra.2007s0054 10.0kb downstream 10.0kb downstream 10000 false Scaffold2007: 198966-208965 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370216 5261 Brassicaceae View MSA
123835557 5264 Brassicales-Malvales View MSA
124347701 5266 SBM View MSA
124239310 5268 Malvidae View MSA
124070975 5270 Rosid View MSA
123749910 5271 Pentapetalae View MSA
122795720 5272 Eudicot View MSA
122050009 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain