Gene : Cagra.1995s0001 C. grandiflora v1.1
Defline:  (1 of 3) PTHR33836:SF1 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED Genomic Order:  1
Name:  ? Cagra.1995s0001 Secondary Identifier:  ? PAC:28914864
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1995s0001 0.5kb upstream 0.5kb upstream 3026 true Scaffold1995: 1-3026 Capsella grandiflora
Cagra.1995s0001 0.5kb upstream 0.5kb upstream 337 false Scaffold1995: 1-337 Capsella grandiflora
Cagra.1995s0001 0.5kb downstream 0.5kb downstream 3189 true Scaffold1995: 338-3526 Capsella grandiflora
Cagra.1995s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold1995: 3027-3526 Capsella grandiflora
Cagra.1995s0001 1.0kb upstream 1.0kb upstream 3026 true Scaffold1995: 1-3026 Capsella grandiflora
Cagra.1995s0001 1.0kb upstream 1.0kb upstream 337 false Scaffold1995: 1-337 Capsella grandiflora
Cagra.1995s0001 1.0kb downstream 1.0kb downstream 3689 true Scaffold1995: 338-4026 Capsella grandiflora
Cagra.1995s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold1995: 3027-4026 Capsella grandiflora
Cagra.1995s0001 2.0kb upstream 2.0kb upstream 3026 true Scaffold1995: 1-3026 Capsella grandiflora
Cagra.1995s0001 2.0kb upstream 2.0kb upstream 337 false Scaffold1995: 1-337 Capsella grandiflora
Cagra.1995s0001 2.0kb downstream 2.0kb downstream 4689 true Scaffold1995: 338-5026 Capsella grandiflora
Cagra.1995s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold1995: 3027-5026 Capsella grandiflora
Cagra.1995s0001 5.0kb upstream 5.0kb upstream 3026 true Scaffold1995: 1-3026 Capsella grandiflora
Cagra.1995s0001 5.0kb upstream 5.0kb upstream 337 false Scaffold1995: 1-337 Capsella grandiflora
Cagra.1995s0001 5.0kb downstream 5.0kb downstream 7689 true Scaffold1995: 338-8026 Capsella grandiflora
Cagra.1995s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold1995: 3027-8026 Capsella grandiflora
Cagra.1995s0001 10.0kb upstream 10.0kb upstream 3026 true Scaffold1995: 1-3026 Capsella grandiflora
Cagra.1995s0001 10.0kb upstream 10.0kb upstream 337 false Scaffold1995: 1-337 Capsella grandiflora
Cagra.1995s0001 10.0kb downstream 10.0kb downstream 12689 true Scaffold1995: 338-13026 Capsella grandiflora
Cagra.1995s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold1995: 3027-13026 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380728 5261 Brassicaceae View MSA
123802868 5264 Brassicales-Malvales View MSA
124300030 5266 SBM View MSA
124251939 5268 Malvidae View MSA
124069753 5270 Rosid View MSA
123745202 5271 Pentapetalae View MSA
122785813 5272 Eudicot View MSA
122050504 5273 Angiosperm View MSA
121311951 5274 Embryophyte View MSA
123349176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain