Gene : Cagra.2064s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11659 - GLUTAMYL-TRNA GLN AMIDOTRANSFERASE SUBUNIT B MITOCHONDRIAL AND PROKARYOTIC PET112-RELATED Genomic Order:  4
Name:  ? Cagra.2064s0004 Secondary Identifier:  ? PAC:28904038
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5921 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2064s0004 0.5kb upstream 0.5kb upstream 3384 true Scaffold2064: 24241-27624 Capsella grandiflora
Cagra.2064s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold2064: 24241-24740 Capsella grandiflora
Cagra.2064s0004 0.5kb downstream 0.5kb downstream 3384 true Scaffold2064: 24741-28124 Capsella grandiflora
Cagra.2064s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold2064: 27625-28124 Capsella grandiflora
Cagra.2064s0004 1.0kb upstream 1.0kb upstream 3884 true Scaffold2064: 23741-27624 Capsella grandiflora
Cagra.2064s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold2064: 23741-24740 Capsella grandiflora
Cagra.2064s0004 1.0kb downstream 1.0kb downstream 3884 true Scaffold2064: 24741-28624 Capsella grandiflora
Cagra.2064s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold2064: 27625-28624 Capsella grandiflora
Cagra.2064s0004 2.0kb upstream 2.0kb upstream 4884 true Scaffold2064: 22741-27624 Capsella grandiflora
Cagra.2064s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold2064: 22741-24740 Capsella grandiflora
Cagra.2064s0004 2.0kb downstream 2.0kb downstream 4884 true Scaffold2064: 24741-29624 Capsella grandiflora
Cagra.2064s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold2064: 27625-29624 Capsella grandiflora
Cagra.2064s0004 5.0kb upstream 5.0kb upstream 7884 true Scaffold2064: 19741-27624 Capsella grandiflora
Cagra.2064s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold2064: 19741-24740 Capsella grandiflora
Cagra.2064s0004 5.0kb downstream 5.0kb downstream 7884 true Scaffold2064: 24741-32624 Capsella grandiflora
Cagra.2064s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold2064: 27625-32624 Capsella grandiflora
Cagra.2064s0004 10.0kb upstream 10.0kb upstream 12884 true Scaffold2064: 14741-27624 Capsella grandiflora
Cagra.2064s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold2064: 14741-24740 Capsella grandiflora
Cagra.2064s0004 10.0kb downstream 10.0kb downstream 12884 true Scaffold2064: 24741-37624 Capsella grandiflora
Cagra.2064s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold2064: 27625-37624 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372656 5261 Brassicaceae View MSA
123832013 5264 Brassicales-Malvales View MSA
124339604 5266 SBM View MSA
124241399 5268 Malvidae View MSA
124063179 5270 Rosid View MSA
123739880 5271 Pentapetalae View MSA
122793755 5272 Eudicot View MSA
122043391 5273 Angiosperm View MSA
121346505 5274 Embryophyte View MSA
123423998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain