Gene : Cagra.1968s0068 C. grandiflora v1.1
Defline:  (1 of 2) PTHR33868:SF2 - EXPRESSED PROTEIN Genomic Order:  68
Name:  ? Cagra.1968s0068 Secondary Identifier:  ? PAC:28910030
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1968s0068 0.5kb upstream 0.5kb upstream 2434 true Scaffold1968: 223566-225999 Capsella grandiflora
Cagra.1968s0068 0.5kb upstream 0.5kb upstream 500 false Scaffold1968: 223566-224065 Capsella grandiflora
Cagra.1968s0068 0.5kb downstream 0.5kb downstream 2434 true Scaffold1968: 224066-226499 Capsella grandiflora
Cagra.1968s0068 0.5kb downstream 0.5kb downstream 500 false Scaffold1968: 226000-226499 Capsella grandiflora
Cagra.1968s0068 1.0kb upstream 1.0kb upstream 2934 true Scaffold1968: 223066-225999 Capsella grandiflora
Cagra.1968s0068 1.0kb upstream 1.0kb upstream 1000 false Scaffold1968: 223066-224065 Capsella grandiflora
Cagra.1968s0068 1.0kb downstream 1.0kb downstream 2934 true Scaffold1968: 224066-226999 Capsella grandiflora
Cagra.1968s0068 1.0kb downstream 1.0kb downstream 1000 false Scaffold1968: 226000-226999 Capsella grandiflora
Cagra.1968s0068 2.0kb upstream 2.0kb upstream 3934 true Scaffold1968: 222066-225999 Capsella grandiflora
Cagra.1968s0068 2.0kb upstream 2.0kb upstream 2000 false Scaffold1968: 222066-224065 Capsella grandiflora
Cagra.1968s0068 2.0kb downstream 2.0kb downstream 3934 true Scaffold1968: 224066-227999 Capsella grandiflora
Cagra.1968s0068 2.0kb downstream 2.0kb downstream 2000 false Scaffold1968: 226000-227999 Capsella grandiflora
Cagra.1968s0068 5.0kb upstream 5.0kb upstream 6934 true Scaffold1968: 219066-225999 Capsella grandiflora
Cagra.1968s0068 5.0kb upstream 5.0kb upstream 5000 false Scaffold1968: 219066-224065 Capsella grandiflora
Cagra.1968s0068 5.0kb downstream 5.0kb downstream 6934 true Scaffold1968: 224066-230999 Capsella grandiflora
Cagra.1968s0068 5.0kb downstream 5.0kb downstream 5000 false Scaffold1968: 226000-230999 Capsella grandiflora
Cagra.1968s0068 10.0kb upstream 10.0kb upstream 11934 true Scaffold1968: 214066-225999 Capsella grandiflora
Cagra.1968s0068 10.0kb upstream 10.0kb upstream 10000 false Scaffold1968: 214066-224065 Capsella grandiflora
Cagra.1968s0068 10.0kb downstream 10.0kb downstream 11934 true Scaffold1968: 224066-235999 Capsella grandiflora
Cagra.1968s0068 10.0kb downstream 10.0kb downstream 10000 false Scaffold1968: 226000-235999 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374406 5261 Brassicaceae View MSA
123800753 5264 Brassicales-Malvales View MSA
124298126 5266 SBM View MSA
124249341 5268 Malvidae View MSA
124070490 5270 Rosid View MSA
123747466 5271 Pentapetalae View MSA
122788794 5272 Eudicot View MSA
122043778 5273 Angiosperm View MSA
121348592 5274 Embryophyte View MSA
123380930 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain