Gene : Cagra.1968s0070 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11514:SF47 - TRANSCRIPTION FACTOR ABA-INDUCIBLE BHLH-TYPE-RELATED Genomic Order:  70
Name:  ? Cagra.1968s0070 Secondary Identifier:  ? PAC:28910026
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1968s0070 0.5kb upstream 0.5kb upstream 3203 true Scaffold1968: 232447-235649 Capsella grandiflora
Cagra.1968s0070 0.5kb upstream 0.5kb upstream 500 false Scaffold1968: 232447-232946 Capsella grandiflora
Cagra.1968s0070 0.5kb downstream 0.5kb downstream 3203 true Scaffold1968: 232947-236149 Capsella grandiflora
Cagra.1968s0070 0.5kb downstream 0.5kb downstream 500 false Scaffold1968: 235650-236149 Capsella grandiflora
Cagra.1968s0070 1.0kb upstream 1.0kb upstream 3703 true Scaffold1968: 231947-235649 Capsella grandiflora
Cagra.1968s0070 1.0kb upstream 1.0kb upstream 1000 false Scaffold1968: 231947-232946 Capsella grandiflora
Cagra.1968s0070 1.0kb downstream 1.0kb downstream 3703 true Scaffold1968: 232947-236649 Capsella grandiflora
Cagra.1968s0070 1.0kb downstream 1.0kb downstream 1000 false Scaffold1968: 235650-236649 Capsella grandiflora
Cagra.1968s0070 2.0kb upstream 2.0kb upstream 4703 true Scaffold1968: 230947-235649 Capsella grandiflora
Cagra.1968s0070 2.0kb upstream 2.0kb upstream 2000 false Scaffold1968: 230947-232946 Capsella grandiflora
Cagra.1968s0070 2.0kb downstream 2.0kb downstream 4703 true Scaffold1968: 232947-237649 Capsella grandiflora
Cagra.1968s0070 2.0kb downstream 2.0kb downstream 2000 false Scaffold1968: 235650-237649 Capsella grandiflora
Cagra.1968s0070 5.0kb upstream 5.0kb upstream 7703 true Scaffold1968: 227947-235649 Capsella grandiflora
Cagra.1968s0070 5.0kb upstream 5.0kb upstream 5000 false Scaffold1968: 227947-232946 Capsella grandiflora
Cagra.1968s0070 5.0kb downstream 5.0kb downstream 7703 true Scaffold1968: 232947-240649 Capsella grandiflora
Cagra.1968s0070 5.0kb downstream 5.0kb downstream 5000 false Scaffold1968: 235650-240649 Capsella grandiflora
Cagra.1968s0070 10.0kb upstream 10.0kb upstream 12703 true Scaffold1968: 222947-235649 Capsella grandiflora
Cagra.1968s0070 10.0kb upstream 10.0kb upstream 10000 false Scaffold1968: 222947-232946 Capsella grandiflora
Cagra.1968s0070 10.0kb downstream 10.0kb downstream 12703 true Scaffold1968: 232947-245649 Capsella grandiflora
Cagra.1968s0070 10.0kb downstream 10.0kb downstream 10000 false Scaffold1968: 235650-245649 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362138 5261 Brassicaceae View MSA
123841251 5264 Brassicales-Malvales View MSA
124346242 5266 SBM View MSA
124237618 5268 Malvidae View MSA
124067031 5270 Rosid View MSA
123743665 5271 Pentapetalae View MSA
122788988 5272 Eudicot View MSA
122049389 5273 Angiosperm View MSA
121351644 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain