Gene : Cagra.1968s0125 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11081:SF23 - FLAP ENDONUCLEASE GEN HOMOLOG 1 Genomic Order:  125
Name:  ? Cagra.1968s0125 Secondary Identifier:  ? PAC:28910017
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1968s0125 0.5kb upstream 0.5kb upstream 3071 true Scaffold1968: 419875-422945 Capsella grandiflora
Cagra.1968s0125 0.5kb upstream 0.5kb upstream 500 false Scaffold1968: 422446-422945 Capsella grandiflora
Cagra.1968s0125 0.5kb downstream 0.5kb downstream 3071 true Scaffold1968: 419375-422445 Capsella grandiflora
Cagra.1968s0125 0.5kb downstream 0.5kb downstream 500 false Scaffold1968: 419375-419874 Capsella grandiflora
Cagra.1968s0125 1.0kb upstream 1.0kb upstream 3571 true Scaffold1968: 419875-423445 Capsella grandiflora
Cagra.1968s0125 1.0kb upstream 1.0kb upstream 1000 false Scaffold1968: 422446-423445 Capsella grandiflora
Cagra.1968s0125 1.0kb downstream 1.0kb downstream 3571 true Scaffold1968: 418875-422445 Capsella grandiflora
Cagra.1968s0125 1.0kb downstream 1.0kb downstream 1000 false Scaffold1968: 418875-419874 Capsella grandiflora
Cagra.1968s0125 2.0kb upstream 2.0kb upstream 4571 true Scaffold1968: 419875-424445 Capsella grandiflora
Cagra.1968s0125 2.0kb upstream 2.0kb upstream 2000 false Scaffold1968: 422446-424445 Capsella grandiflora
Cagra.1968s0125 2.0kb downstream 2.0kb downstream 4571 true Scaffold1968: 417875-422445 Capsella grandiflora
Cagra.1968s0125 2.0kb downstream 2.0kb downstream 2000 false Scaffold1968: 417875-419874 Capsella grandiflora
Cagra.1968s0125 5.0kb upstream 5.0kb upstream 7571 true Scaffold1968: 419875-427445 Capsella grandiflora
Cagra.1968s0125 5.0kb upstream 5.0kb upstream 5000 false Scaffold1968: 422446-427445 Capsella grandiflora
Cagra.1968s0125 5.0kb downstream 5.0kb downstream 7571 true Scaffold1968: 414875-422445 Capsella grandiflora
Cagra.1968s0125 5.0kb downstream 5.0kb downstream 5000 false Scaffold1968: 414875-419874 Capsella grandiflora
Cagra.1968s0125 10.0kb upstream 10.0kb upstream 12571 true Scaffold1968: 419875-432445 Capsella grandiflora
Cagra.1968s0125 10.0kb upstream 10.0kb upstream 10000 false Scaffold1968: 422446-432445 Capsella grandiflora
Cagra.1968s0125 10.0kb downstream 10.0kb downstream 12571 true Scaffold1968: 409875-422445 Capsella grandiflora
Cagra.1968s0125 10.0kb downstream 10.0kb downstream 10000 false Scaffold1968: 409875-419874 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363501 5261 Brassicaceae View MSA
123828180 5264 Brassicales-Malvales View MSA
124342589 5266 SBM View MSA
124240120 5268 Malvidae View MSA
124071440 5270 Rosid View MSA
123738836 5271 Pentapetalae View MSA
122786263 5272 Eudicot View MSA
122047356 5273 Angiosperm View MSA
121351404 5274 Embryophyte View MSA
123425829 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain