Gene : Cagra.1961s0074 C. grandiflora v1.1
Defline:  (1 of 2) 2.3.1.179 - Beta-ketoacyl-[acyl-carrier-protein] synthase II / KASII Genomic Order:  74
Name:  ? Cagra.1961s0074 Secondary Identifier:  ? PAC:28911497
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora FASYN-ELONG-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-5156 Capsella grandiflora pathologic  
Cgrandiflora PWY-5971 Capsella grandiflora pathologic  
Cgrandiflora PWY-5973 Capsella grandiflora pathologic  
Cgrandiflora PWY-5989 Capsella grandiflora pathologic  
Cgrandiflora PWY-6282 Capsella grandiflora pathologic  
Cgrandiflora PWY-7388 Capsella grandiflora pathologic  
Cgrandiflora PWY-7663 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1961s0074 0.5kb upstream 0.5kb upstream 4866 true Scaffold1961: 284950-289815 Capsella grandiflora
Cagra.1961s0074 0.5kb upstream 0.5kb upstream 500 false Scaffold1961: 284950-285449 Capsella grandiflora
Cagra.1961s0074 0.5kb downstream 0.5kb downstream 4866 true Scaffold1961: 285450-290315 Capsella grandiflora
Cagra.1961s0074 0.5kb downstream 0.5kb downstream 500 false Scaffold1961: 289816-290315 Capsella grandiflora
Cagra.1961s0074 1.0kb upstream 1.0kb upstream 5366 true Scaffold1961: 284450-289815 Capsella grandiflora
Cagra.1961s0074 1.0kb upstream 1.0kb upstream 1000 false Scaffold1961: 284450-285449 Capsella grandiflora
Cagra.1961s0074 1.0kb downstream 1.0kb downstream 5366 true Scaffold1961: 285450-290815 Capsella grandiflora
Cagra.1961s0074 1.0kb downstream 1.0kb downstream 1000 false Scaffold1961: 289816-290815 Capsella grandiflora
Cagra.1961s0074 2.0kb upstream 2.0kb upstream 6366 true Scaffold1961: 283450-289815 Capsella grandiflora
Cagra.1961s0074 2.0kb upstream 2.0kb upstream 2000 false Scaffold1961: 283450-285449 Capsella grandiflora
Cagra.1961s0074 2.0kb downstream 2.0kb downstream 6366 true Scaffold1961: 285450-291815 Capsella grandiflora
Cagra.1961s0074 2.0kb downstream 2.0kb downstream 2000 false Scaffold1961: 289816-291815 Capsella grandiflora
Cagra.1961s0074 5.0kb upstream 5.0kb upstream 9366 true Scaffold1961: 280450-289815 Capsella grandiflora
Cagra.1961s0074 5.0kb upstream 5.0kb upstream 5000 false Scaffold1961: 280450-285449 Capsella grandiflora
Cagra.1961s0074 5.0kb downstream 5.0kb downstream 9366 true Scaffold1961: 285450-294815 Capsella grandiflora
Cagra.1961s0074 5.0kb downstream 5.0kb downstream 5000 false Scaffold1961: 289816-294815 Capsella grandiflora
Cagra.1961s0074 10.0kb upstream 10.0kb upstream 14366 true Scaffold1961: 275450-289815 Capsella grandiflora
Cagra.1961s0074 10.0kb upstream 10.0kb upstream 10000 false Scaffold1961: 275450-285449 Capsella grandiflora
Cagra.1961s0074 10.0kb downstream 10.0kb downstream 14366 true Scaffold1961: 285450-299815 Capsella grandiflora
Cagra.1961s0074 10.0kb downstream 10.0kb downstream 10000 false Scaffold1961: 289816-299815 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377296 5261 Brassicaceae View MSA
123839489 5264 Brassicales-Malvales View MSA
124340409 5266 SBM View MSA
124244965 5268 Malvidae View MSA
124071420 5270 Rosid View MSA
123738483 5271 Pentapetalae View MSA
122792751 5272 Eudicot View MSA
122051170 5273 Angiosperm View MSA
121345587 5274 Embryophyte View MSA
123424058 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain