Gene : Cagra.1961s0072 C. grandiflora v1.1
Defline:  (1 of 410) PF13041 - PPR repeat family (PPR_2) Genomic Order:  72
Name:  ? Cagra.1961s0072 Secondary Identifier:  ? PAC:28911590
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1961s0072 0.5kb upstream 0.5kb upstream 4349 true Scaffold1961: 276110-280458 Capsella grandiflora
Cagra.1961s0072 0.5kb upstream 0.5kb upstream 500 false Scaffold1961: 279959-280458 Capsella grandiflora
Cagra.1961s0072 0.5kb downstream 0.5kb downstream 4349 true Scaffold1961: 275610-279958 Capsella grandiflora
Cagra.1961s0072 0.5kb downstream 0.5kb downstream 500 false Scaffold1961: 275610-276109 Capsella grandiflora
Cagra.1961s0072 1.0kb upstream 1.0kb upstream 4849 true Scaffold1961: 276110-280958 Capsella grandiflora
Cagra.1961s0072 1.0kb upstream 1.0kb upstream 1000 false Scaffold1961: 279959-280958 Capsella grandiflora
Cagra.1961s0072 1.0kb downstream 1.0kb downstream 4849 true Scaffold1961: 275110-279958 Capsella grandiflora
Cagra.1961s0072 1.0kb downstream 1.0kb downstream 1000 false Scaffold1961: 275110-276109 Capsella grandiflora
Cagra.1961s0072 2.0kb upstream 2.0kb upstream 5849 true Scaffold1961: 276110-281958 Capsella grandiflora
Cagra.1961s0072 2.0kb upstream 2.0kb upstream 2000 false Scaffold1961: 279959-281958 Capsella grandiflora
Cagra.1961s0072 2.0kb downstream 2.0kb downstream 5849 true Scaffold1961: 274110-279958 Capsella grandiflora
Cagra.1961s0072 2.0kb downstream 2.0kb downstream 2000 false Scaffold1961: 274110-276109 Capsella grandiflora
Cagra.1961s0072 5.0kb upstream 5.0kb upstream 8849 true Scaffold1961: 276110-284958 Capsella grandiflora
Cagra.1961s0072 5.0kb upstream 5.0kb upstream 5000 false Scaffold1961: 279959-284958 Capsella grandiflora
Cagra.1961s0072 5.0kb downstream 5.0kb downstream 8849 true Scaffold1961: 271110-279958 Capsella grandiflora
Cagra.1961s0072 5.0kb downstream 5.0kb downstream 5000 false Scaffold1961: 271110-276109 Capsella grandiflora
Cagra.1961s0072 10.0kb upstream 10.0kb upstream 13849 true Scaffold1961: 276110-289958 Capsella grandiflora
Cagra.1961s0072 10.0kb upstream 10.0kb upstream 10000 false Scaffold1961: 279959-289958 Capsella grandiflora
Cagra.1961s0072 10.0kb downstream 10.0kb downstream 13849 true Scaffold1961: 266110-279958 Capsella grandiflora
Cagra.1961s0072 10.0kb downstream 10.0kb downstream 10000 false Scaffold1961: 266110-276109 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366341 5261 Brassicaceae View MSA
123833911 5264 Brassicales-Malvales View MSA
124336604 5266 SBM View MSA
124237767 5268 Malvidae View MSA
124068595 5270 Rosid View MSA
123745749 5271 Pentapetalae View MSA
122788083 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain