Gene : Cagra.1968s0012 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11964:SF18 - S-ADENOSYLMETHIONINE SYNTHASE 2 Genomic Order:  12
Name:  ? Cagra.1968s0012 Secondary Identifier:  ? PAC:28910035
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ETHYL-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-5041 Capsella grandiflora pathologic  
Cgrandiflora PWY-7270 Capsella grandiflora pathologic  
Cgrandiflora PWY-7528 Capsella grandiflora pathologic  
Cgrandiflora SAM-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1968s0012 0.5kb upstream 0.5kb upstream 2477 true Scaffold1968: 34506-36982 Capsella grandiflora
Cagra.1968s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold1968: 36483-36982 Capsella grandiflora
Cagra.1968s0012 0.5kb downstream 0.5kb downstream 2477 true Scaffold1968: 34006-36482 Capsella grandiflora
Cagra.1968s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold1968: 34006-34505 Capsella grandiflora
Cagra.1968s0012 1.0kb upstream 1.0kb upstream 2977 true Scaffold1968: 34506-37482 Capsella grandiflora
Cagra.1968s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold1968: 36483-37482 Capsella grandiflora
Cagra.1968s0012 1.0kb downstream 1.0kb downstream 2977 true Scaffold1968: 33506-36482 Capsella grandiflora
Cagra.1968s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold1968: 33506-34505 Capsella grandiflora
Cagra.1968s0012 2.0kb upstream 2.0kb upstream 3977 true Scaffold1968: 34506-38482 Capsella grandiflora
Cagra.1968s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold1968: 36483-38482 Capsella grandiflora
Cagra.1968s0012 2.0kb downstream 2.0kb downstream 3977 true Scaffold1968: 32506-36482 Capsella grandiflora
Cagra.1968s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold1968: 32506-34505 Capsella grandiflora
Cagra.1968s0012 5.0kb upstream 5.0kb upstream 6977 true Scaffold1968: 34506-41482 Capsella grandiflora
Cagra.1968s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold1968: 36483-41482 Capsella grandiflora
Cagra.1968s0012 5.0kb downstream 5.0kb downstream 6977 true Scaffold1968: 29506-36482 Capsella grandiflora
Cagra.1968s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold1968: 29506-34505 Capsella grandiflora
Cagra.1968s0012 10.0kb upstream 10.0kb upstream 11977 true Scaffold1968: 34506-46482 Capsella grandiflora
Cagra.1968s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold1968: 36483-46482 Capsella grandiflora
Cagra.1968s0012 10.0kb downstream 10.0kb downstream 11977 true Scaffold1968: 24506-36482 Capsella grandiflora
Cagra.1968s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold1968: 24506-34505 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379467 5261 Brassicaceae View MSA
123837532 5264 Brassicales-Malvales View MSA
124340707 5266 SBM View MSA
124247554 5268 Malvidae View MSA
124071804 5270 Rosid View MSA
123752865 5271 Pentapetalae View MSA
122794208 5272 Eudicot View MSA
122047125 5273 Angiosperm View MSA
121349455 5274 Embryophyte View MSA
123428115 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain