Gene : Cagra.1960s0006 C. grandiflora v1.1
Defline:  (1 of 1) PTHR15371:SF2 - OUTER ENVELOPE PORE PROTEIN 16-1, CHLOROPLASTIC Genomic Order:  6
Name:  ? Cagra.1960s0006 Secondary Identifier:  ? PAC:28895033
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1960s0006 0.5kb upstream 0.5kb upstream 1695 true Scaffold1960: 46688-48382 Capsella grandiflora
Cagra.1960s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold1960: 47883-48382 Capsella grandiflora
Cagra.1960s0006 0.5kb downstream 0.5kb downstream 1695 true Scaffold1960: 46188-47882 Capsella grandiflora
Cagra.1960s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold1960: 46188-46687 Capsella grandiflora
Cagra.1960s0006 1.0kb upstream 1.0kb upstream 2195 true Scaffold1960: 46688-48882 Capsella grandiflora
Cagra.1960s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold1960: 47883-48882 Capsella grandiflora
Cagra.1960s0006 1.0kb downstream 1.0kb downstream 2195 true Scaffold1960: 45688-47882 Capsella grandiflora
Cagra.1960s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold1960: 45688-46687 Capsella grandiflora
Cagra.1960s0006 2.0kb upstream 2.0kb upstream 3195 true Scaffold1960: 46688-49882 Capsella grandiflora
Cagra.1960s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold1960: 47883-49882 Capsella grandiflora
Cagra.1960s0006 2.0kb downstream 2.0kb downstream 3195 true Scaffold1960: 44688-47882 Capsella grandiflora
Cagra.1960s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold1960: 44688-46687 Capsella grandiflora
Cagra.1960s0006 5.0kb upstream 5.0kb upstream 6195 true Scaffold1960: 46688-52882 Capsella grandiflora
Cagra.1960s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold1960: 47883-52882 Capsella grandiflora
Cagra.1960s0006 5.0kb downstream 5.0kb downstream 6195 true Scaffold1960: 41688-47882 Capsella grandiflora
Cagra.1960s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold1960: 41688-46687 Capsella grandiflora
Cagra.1960s0006 10.0kb upstream 10.0kb upstream 11195 true Scaffold1960: 46688-57882 Capsella grandiflora
Cagra.1960s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold1960: 47883-57882 Capsella grandiflora
Cagra.1960s0006 10.0kb downstream 10.0kb downstream 11195 true Scaffold1960: 36688-47882 Capsella grandiflora
Cagra.1960s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold1960: 36688-46687 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369401 5261 Brassicaceae View MSA
123828352 5264 Brassicales-Malvales View MSA
124344240 5266 SBM View MSA
124238001 5268 Malvidae View MSA
124068444 5270 Rosid View MSA
123739321 5271 Pentapetalae View MSA
122787422 5272 Eudicot View MSA
122042494 5273 Angiosperm View MSA
121351081 5274 Embryophyte View MSA
123382000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain