Gene : Cagra.2261s0010 C. grandiflora v1.1
Defline:  (1 of 9) 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase Genomic Order:  10
Name:  ? Cagra.2261s0010 Secondary Identifier:  ? PAC:28907001
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5080 Capsella grandiflora pathologic  
Cgrandiflora PWY-6433 Capsella grandiflora pathologic  
Cgrandiflora PWY-6598 Capsella grandiflora pathologic  
Cgrandiflora PWY-7036 Capsella grandiflora pathologic  
Cgrandiflora PWY-7601 Capsella grandiflora pathologic  
Cgrandiflora PWY-7606 Capsella grandiflora pathologic  
Cgrandiflora PWY-7619 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2261s0010 0.5kb upstream 0.5kb upstream 2548 true Scaffold2261: 33749-36296 Capsella grandiflora
Cagra.2261s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold2261: 35797-36296 Capsella grandiflora
Cagra.2261s0010 0.5kb downstream 0.5kb downstream 2548 true Scaffold2261: 33249-35796 Capsella grandiflora
Cagra.2261s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold2261: 33249-33748 Capsella grandiflora
Cagra.2261s0010 1.0kb upstream 1.0kb upstream 3048 true Scaffold2261: 33749-36796 Capsella grandiflora
Cagra.2261s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold2261: 35797-36796 Capsella grandiflora
Cagra.2261s0010 1.0kb downstream 1.0kb downstream 3048 true Scaffold2261: 32749-35796 Capsella grandiflora
Cagra.2261s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold2261: 32749-33748 Capsella grandiflora
Cagra.2261s0010 2.0kb upstream 2.0kb upstream 4048 true Scaffold2261: 33749-37796 Capsella grandiflora
Cagra.2261s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold2261: 35797-37796 Capsella grandiflora
Cagra.2261s0010 2.0kb downstream 2.0kb downstream 4048 true Scaffold2261: 31749-35796 Capsella grandiflora
Cagra.2261s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold2261: 31749-33748 Capsella grandiflora
Cagra.2261s0010 5.0kb upstream 5.0kb upstream 7048 true Scaffold2261: 33749-40796 Capsella grandiflora
Cagra.2261s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold2261: 35797-40796 Capsella grandiflora
Cagra.2261s0010 5.0kb downstream 5.0kb downstream 7048 true Scaffold2261: 28749-35796 Capsella grandiflora
Cagra.2261s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold2261: 28749-33748 Capsella grandiflora
Cagra.2261s0010 10.0kb upstream 10.0kb upstream 12048 true Scaffold2261: 33749-45796 Capsella grandiflora
Cagra.2261s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold2261: 35797-45796 Capsella grandiflora
Cagra.2261s0010 10.0kb downstream 10.0kb downstream 12048 true Scaffold2261: 23749-35796 Capsella grandiflora
Cagra.2261s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold2261: 23749-33748 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367106 5261 Brassicaceae View MSA
123831568 5264 Brassicales-Malvales View MSA
124344917 5266 SBM View MSA
124251329 5268 Malvidae View MSA
124067012 5270 Rosid View MSA
123737536 5271 Pentapetalae View MSA
122787991 5272 Eudicot View MSA
122050087 5273 Angiosperm View MSA
123428985 5275 Viridiplantae View MSA
121351563 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain