Gene : Cagra.2261s0016 C. grandiflora v1.1
Defline:  (1 of 2) PF09588 - YqaJ-like viral recombinase domain (YqaJ) Genomic Order:  16
Name:  ? Cagra.2261s0016 Secondary Identifier:  ? PAC:28906988
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Expression

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2261s0016 0.5kb upstream 0.5kb upstream 2070 true Scaffold2261: 64827-66896 Capsella grandiflora
Cagra.2261s0016 0.5kb upstream 0.5kb upstream 343 false Scaffold2261: 66554-66896 Capsella grandiflora
Cagra.2261s0016 0.5kb downstream 0.5kb downstream 2227 true Scaffold2261: 64327-66553 Capsella grandiflora
Cagra.2261s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold2261: 64327-64826 Capsella grandiflora
Cagra.2261s0016 1.0kb upstream 1.0kb upstream 2070 true Scaffold2261: 64827-66896 Capsella grandiflora
Cagra.2261s0016 1.0kb upstream 1.0kb upstream 343 false Scaffold2261: 66554-66896 Capsella grandiflora
Cagra.2261s0016 1.0kb downstream 1.0kb downstream 2727 true Scaffold2261: 63827-66553 Capsella grandiflora
Cagra.2261s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold2261: 63827-64826 Capsella grandiflora
Cagra.2261s0016 2.0kb upstream 2.0kb upstream 2070 true Scaffold2261: 64827-66896 Capsella grandiflora
Cagra.2261s0016 2.0kb upstream 2.0kb upstream 343 false Scaffold2261: 66554-66896 Capsella grandiflora
Cagra.2261s0016 2.0kb downstream 2.0kb downstream 3727 true Scaffold2261: 62827-66553 Capsella grandiflora
Cagra.2261s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold2261: 62827-64826 Capsella grandiflora
Cagra.2261s0016 5.0kb upstream 5.0kb upstream 2070 true Scaffold2261: 64827-66896 Capsella grandiflora
Cagra.2261s0016 5.0kb upstream 5.0kb upstream 343 false Scaffold2261: 66554-66896 Capsella grandiflora
Cagra.2261s0016 5.0kb downstream 5.0kb downstream 6727 true Scaffold2261: 59827-66553 Capsella grandiflora
Cagra.2261s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold2261: 59827-64826 Capsella grandiflora
Cagra.2261s0016 10.0kb upstream 10.0kb upstream 2070 true Scaffold2261: 64827-66896 Capsella grandiflora
Cagra.2261s0016 10.0kb upstream 10.0kb upstream 343 false Scaffold2261: 66554-66896 Capsella grandiflora
Cagra.2261s0016 10.0kb downstream 10.0kb downstream 11727 true Scaffold2261: 54827-66553 Capsella grandiflora
Cagra.2261s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold2261: 54827-64826 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364061 5261 Brassicaceae View MSA
123833235 5264 Brassicales-Malvales View MSA
124337430 5266 SBM View MSA
124237127 5268 Malvidae View MSA
124064584 5270 Rosid View MSA
123738180 5271 Pentapetalae View MSA
122790598 5272 Eudicot View MSA
122045989 5273 Angiosperm View MSA
123429076 5275 Viridiplantae View MSA
121346090 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain