Gene : Cagra.2240s0021 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12802:SF52 - PROTEIN REVEILLE 4-RELATED Genomic Order:  21
Name:  ? Cagra.2240s0021 Secondary Identifier:  ? PAC:28911981
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2240s0021 0.5kb upstream 0.5kb upstream 3761 true Scaffold2240: 73141-76901 Capsella grandiflora
Cagra.2240s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold2240: 76402-76901 Capsella grandiflora
Cagra.2240s0021 0.5kb downstream 0.5kb downstream 3761 true Scaffold2240: 72641-76401 Capsella grandiflora
Cagra.2240s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold2240: 72641-73140 Capsella grandiflora
Cagra.2240s0021 1.0kb upstream 1.0kb upstream 4261 true Scaffold2240: 73141-77401 Capsella grandiflora
Cagra.2240s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold2240: 76402-77401 Capsella grandiflora
Cagra.2240s0021 1.0kb downstream 1.0kb downstream 4261 true Scaffold2240: 72141-76401 Capsella grandiflora
Cagra.2240s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold2240: 72141-73140 Capsella grandiflora
Cagra.2240s0021 2.0kb upstream 2.0kb upstream 5261 true Scaffold2240: 73141-78401 Capsella grandiflora
Cagra.2240s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold2240: 76402-78401 Capsella grandiflora
Cagra.2240s0021 2.0kb downstream 2.0kb downstream 5261 true Scaffold2240: 71141-76401 Capsella grandiflora
Cagra.2240s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold2240: 71141-73140 Capsella grandiflora
Cagra.2240s0021 5.0kb upstream 5.0kb upstream 8261 true Scaffold2240: 73141-81401 Capsella grandiflora
Cagra.2240s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold2240: 76402-81401 Capsella grandiflora
Cagra.2240s0021 5.0kb downstream 5.0kb downstream 8261 true Scaffold2240: 68141-76401 Capsella grandiflora
Cagra.2240s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold2240: 68141-73140 Capsella grandiflora
Cagra.2240s0021 10.0kb upstream 10.0kb upstream 13261 true Scaffold2240: 73141-86401 Capsella grandiflora
Cagra.2240s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold2240: 76402-86401 Capsella grandiflora
Cagra.2240s0021 10.0kb downstream 10.0kb downstream 13261 true Scaffold2240: 63141-76401 Capsella grandiflora
Cagra.2240s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold2240: 63141-73140 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367425 5261 Brassicaceae View MSA
123837867 5264 Brassicales-Malvales View MSA
124342123 5266 SBM View MSA
124250062 5268 Malvidae View MSA
124061297 5270 Rosid View MSA
123737493 5271 Pentapetalae View MSA
122797418 5272 Eudicot View MSA
122043190 5273 Angiosperm View MSA
121350765 5274 Embryophyte View MSA
123427162 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain