Gene : Cagra.2248s0011 C. grandiflora v1.1
Defline:  (1 of 1) PTHR32285:SF18 - PROTEIN YLS7-RELATED Genomic Order:  11
Name:  ? Cagra.2248s0011 Secondary Identifier:  ? PAC:28917998
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2248s0011 0.5kb upstream 0.5kb upstream 3694 true Scaffold2248: 29189-32882 Capsella grandiflora
Cagra.2248s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold2248: 29189-29688 Capsella grandiflora
Cagra.2248s0011 0.5kb downstream 0.5kb downstream 3694 true Scaffold2248: 29689-33382 Capsella grandiflora
Cagra.2248s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold2248: 32883-33382 Capsella grandiflora
Cagra.2248s0011 1.0kb upstream 1.0kb upstream 4194 true Scaffold2248: 28689-32882 Capsella grandiflora
Cagra.2248s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold2248: 28689-29688 Capsella grandiflora
Cagra.2248s0011 1.0kb downstream 1.0kb downstream 4194 true Scaffold2248: 29689-33882 Capsella grandiflora
Cagra.2248s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold2248: 32883-33882 Capsella grandiflora
Cagra.2248s0011 2.0kb upstream 2.0kb upstream 5194 true Scaffold2248: 27689-32882 Capsella grandiflora
Cagra.2248s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold2248: 27689-29688 Capsella grandiflora
Cagra.2248s0011 2.0kb downstream 2.0kb downstream 5194 true Scaffold2248: 29689-34882 Capsella grandiflora
Cagra.2248s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold2248: 32883-34882 Capsella grandiflora
Cagra.2248s0011 5.0kb upstream 5.0kb upstream 8194 true Scaffold2248: 24689-32882 Capsella grandiflora
Cagra.2248s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold2248: 24689-29688 Capsella grandiflora
Cagra.2248s0011 5.0kb downstream 5.0kb downstream 8194 true Scaffold2248: 29689-37882 Capsella grandiflora
Cagra.2248s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold2248: 32883-37882 Capsella grandiflora
Cagra.2248s0011 10.0kb upstream 10.0kb upstream 13194 true Scaffold2248: 19689-32882 Capsella grandiflora
Cagra.2248s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold2248: 19689-29688 Capsella grandiflora
Cagra.2248s0011 10.0kb downstream 10.0kb downstream 13194 true Scaffold2248: 29689-42882 Capsella grandiflora
Cagra.2248s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold2248: 32883-42882 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369348 5261 Brassicaceae View MSA
123839269 5264 Brassicales-Malvales View MSA
124339637 5266 SBM View MSA
124251145 5268 Malvidae View MSA
124061312 5270 Rosid View MSA
123751556 5271 Pentapetalae View MSA
122785913 5272 Eudicot View MSA
122043829 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121345496 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain