Gene : Cagra.2248s0012 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11638//PTHR11638:SF105 - ATP-DEPENDENT CLP PROTEASE Genomic Order:  12
Name:  ? Cagra.2248s0012 Secondary Identifier:  ? PAC:28917986
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2248s0012 0.5kb upstream 0.5kb upstream 2748 true Scaffold2248: 32455-35202 Capsella grandiflora
Cagra.2248s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold2248: 32455-32954 Capsella grandiflora
Cagra.2248s0012 0.5kb downstream 0.5kb downstream 2748 true Scaffold2248: 32955-35702 Capsella grandiflora
Cagra.2248s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold2248: 35203-35702 Capsella grandiflora
Cagra.2248s0012 1.0kb upstream 1.0kb upstream 3248 true Scaffold2248: 31955-35202 Capsella grandiflora
Cagra.2248s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold2248: 31955-32954 Capsella grandiflora
Cagra.2248s0012 1.0kb downstream 1.0kb downstream 3248 true Scaffold2248: 32955-36202 Capsella grandiflora
Cagra.2248s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold2248: 35203-36202 Capsella grandiflora
Cagra.2248s0012 2.0kb upstream 2.0kb upstream 4248 true Scaffold2248: 30955-35202 Capsella grandiflora
Cagra.2248s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold2248: 30955-32954 Capsella grandiflora
Cagra.2248s0012 2.0kb downstream 2.0kb downstream 4248 true Scaffold2248: 32955-37202 Capsella grandiflora
Cagra.2248s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold2248: 35203-37202 Capsella grandiflora
Cagra.2248s0012 5.0kb upstream 5.0kb upstream 7248 true Scaffold2248: 27955-35202 Capsella grandiflora
Cagra.2248s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold2248: 27955-32954 Capsella grandiflora
Cagra.2248s0012 5.0kb downstream 5.0kb downstream 7248 true Scaffold2248: 32955-40202 Capsella grandiflora
Cagra.2248s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold2248: 35203-40202 Capsella grandiflora
Cagra.2248s0012 10.0kb upstream 10.0kb upstream 12248 true Scaffold2248: 22955-35202 Capsella grandiflora
Cagra.2248s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold2248: 22955-32954 Capsella grandiflora
Cagra.2248s0012 10.0kb downstream 10.0kb downstream 12248 true Scaffold2248: 32955-45202 Capsella grandiflora
Cagra.2248s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold2248: 35203-45202 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371950 5261 Brassicaceae View MSA
123833611 5264 Brassicales-Malvales View MSA
124346269 5266 SBM View MSA
124252123 5268 Malvidae View MSA
124064515 5270 Rosid View MSA
123741380 5271 Pentapetalae View MSA
122789129 5272 Eudicot View MSA
122047723 5273 Angiosperm View MSA
121348075 5274 Embryophyte View MSA
123425862 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain