Gene : Cagra.2252s0012 C. grandiflora v1.1
Defline:  (1 of 61) PF14368 - Probable lipid transfer (LTP_2) Genomic Order:  12
Name:  ? Cagra.2252s0012 Secondary Identifier:  ? PAC:28901545
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2252s0012 0.5kb upstream 0.5kb upstream 1176 true Scaffold2252: 39362-40537 Capsella grandiflora
Cagra.2252s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold2252: 39362-39861 Capsella grandiflora
Cagra.2252s0012 0.5kb downstream 0.5kb downstream 1176 true Scaffold2252: 39862-41037 Capsella grandiflora
Cagra.2252s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold2252: 40538-41037 Capsella grandiflora
Cagra.2252s0012 1.0kb upstream 1.0kb upstream 1676 true Scaffold2252: 38862-40537 Capsella grandiflora
Cagra.2252s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold2252: 38862-39861 Capsella grandiflora
Cagra.2252s0012 1.0kb downstream 1.0kb downstream 1676 true Scaffold2252: 39862-41537 Capsella grandiflora
Cagra.2252s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold2252: 40538-41537 Capsella grandiflora
Cagra.2252s0012 2.0kb upstream 2.0kb upstream 2676 true Scaffold2252: 37862-40537 Capsella grandiflora
Cagra.2252s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold2252: 37862-39861 Capsella grandiflora
Cagra.2252s0012 2.0kb downstream 2.0kb downstream 2676 true Scaffold2252: 39862-42537 Capsella grandiflora
Cagra.2252s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold2252: 40538-42537 Capsella grandiflora
Cagra.2252s0012 5.0kb upstream 5.0kb upstream 5676 true Scaffold2252: 34862-40537 Capsella grandiflora
Cagra.2252s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold2252: 34862-39861 Capsella grandiflora
Cagra.2252s0012 5.0kb downstream 5.0kb downstream 5676 true Scaffold2252: 39862-45537 Capsella grandiflora
Cagra.2252s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold2252: 40538-45537 Capsella grandiflora
Cagra.2252s0012 10.0kb upstream 10.0kb upstream 10676 true Scaffold2252: 29862-40537 Capsella grandiflora
Cagra.2252s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold2252: 29862-39861 Capsella grandiflora
Cagra.2252s0012 10.0kb downstream 10.0kb downstream 10676 true Scaffold2252: 39862-50537 Capsella grandiflora
Cagra.2252s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold2252: 40538-50537 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366699 5261 Brassicaceae View MSA
123835793 5264 Brassicales-Malvales View MSA
124350487 5266 SBM View MSA
124244554 5268 Malvidae View MSA
124067759 5270 Rosid View MSA
123740142 5271 Pentapetalae View MSA
122796830 5272 Eudicot View MSA
122050934 5273 Angiosperm View MSA
121351204 5274 Embryophyte View MSA
123382050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain