Gene : Cagra.2252s0011 C. grandiflora v1.1
Defline:  (1 of 42) PF00582 - Universal stress protein family (Usp) Genomic Order:  11
Name:  ? Cagra.2252s0011 Secondary Identifier:  ? PAC:28901543
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2252s0011 0.5kb upstream 0.5kb upstream 2041 true Scaffold2252: 36523-38563 Capsella grandiflora
Cagra.2252s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold2252: 36523-37022 Capsella grandiflora
Cagra.2252s0011 0.5kb downstream 0.5kb downstream 2041 true Scaffold2252: 37023-39063 Capsella grandiflora
Cagra.2252s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold2252: 38564-39063 Capsella grandiflora
Cagra.2252s0011 1.0kb upstream 1.0kb upstream 2541 true Scaffold2252: 36023-38563 Capsella grandiflora
Cagra.2252s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold2252: 36023-37022 Capsella grandiflora
Cagra.2252s0011 1.0kb downstream 1.0kb downstream 2541 true Scaffold2252: 37023-39563 Capsella grandiflora
Cagra.2252s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold2252: 38564-39563 Capsella grandiflora
Cagra.2252s0011 2.0kb upstream 2.0kb upstream 3541 true Scaffold2252: 35023-38563 Capsella grandiflora
Cagra.2252s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold2252: 35023-37022 Capsella grandiflora
Cagra.2252s0011 2.0kb downstream 2.0kb downstream 3541 true Scaffold2252: 37023-40563 Capsella grandiflora
Cagra.2252s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold2252: 38564-40563 Capsella grandiflora
Cagra.2252s0011 5.0kb upstream 5.0kb upstream 6541 true Scaffold2252: 32023-38563 Capsella grandiflora
Cagra.2252s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold2252: 32023-37022 Capsella grandiflora
Cagra.2252s0011 5.0kb downstream 5.0kb downstream 6541 true Scaffold2252: 37023-43563 Capsella grandiflora
Cagra.2252s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold2252: 38564-43563 Capsella grandiflora
Cagra.2252s0011 10.0kb upstream 10.0kb upstream 11541 true Scaffold2252: 27023-38563 Capsella grandiflora
Cagra.2252s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold2252: 27023-37022 Capsella grandiflora
Cagra.2252s0011 10.0kb downstream 10.0kb downstream 11541 true Scaffold2252: 37023-48563 Capsella grandiflora
Cagra.2252s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold2252: 38564-48563 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380009 5261 Brassicaceae View MSA
123834842 5264 Brassicales-Malvales View MSA
124350362 5266 SBM View MSA
124243263 5268 Malvidae View MSA
124061330 5270 Rosid View MSA
123742988 5271 Pentapetalae View MSA
122795683 5272 Eudicot View MSA
122048128 5273 Angiosperm View MSA
121348607 5274 Embryophyte View MSA
123427901 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain