Gene : Cagra.2238s0016 C. grandiflora v1.1
Defline:  (1 of 1) PTHR16517:SF27 - TUBBY-LIKE PROTEIN 8 Genomic Order:  16
Name:  ? Cagra.2238s0016 Secondary Identifier:  ? PAC:28918258
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2238s0016 0.5kb upstream 0.5kb upstream 2545 true Scaffold2238: 43077-45621 Capsella grandiflora
Cagra.2238s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold2238: 43077-43576 Capsella grandiflora
Cagra.2238s0016 0.5kb downstream 0.5kb downstream 2545 true Scaffold2238: 43577-46121 Capsella grandiflora
Cagra.2238s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold2238: 45622-46121 Capsella grandiflora
Cagra.2238s0016 1.0kb upstream 1.0kb upstream 3045 true Scaffold2238: 42577-45621 Capsella grandiflora
Cagra.2238s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold2238: 42577-43576 Capsella grandiflora
Cagra.2238s0016 1.0kb downstream 1.0kb downstream 3045 true Scaffold2238: 43577-46621 Capsella grandiflora
Cagra.2238s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold2238: 45622-46621 Capsella grandiflora
Cagra.2238s0016 2.0kb upstream 2.0kb upstream 4045 true Scaffold2238: 41577-45621 Capsella grandiflora
Cagra.2238s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold2238: 41577-43576 Capsella grandiflora
Cagra.2238s0016 2.0kb downstream 2.0kb downstream 4045 true Scaffold2238: 43577-47621 Capsella grandiflora
Cagra.2238s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold2238: 45622-47621 Capsella grandiflora
Cagra.2238s0016 5.0kb upstream 5.0kb upstream 7045 true Scaffold2238: 38577-45621 Capsella grandiflora
Cagra.2238s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold2238: 38577-43576 Capsella grandiflora
Cagra.2238s0016 5.0kb downstream 5.0kb downstream 7045 true Scaffold2238: 43577-50621 Capsella grandiflora
Cagra.2238s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold2238: 45622-50621 Capsella grandiflora
Cagra.2238s0016 10.0kb upstream 10.0kb upstream 12045 true Scaffold2238: 33577-45621 Capsella grandiflora
Cagra.2238s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold2238: 33577-43576 Capsella grandiflora
Cagra.2238s0016 10.0kb downstream 10.0kb downstream 12045 true Scaffold2238: 43577-55621 Capsella grandiflora
Cagra.2238s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold2238: 45622-55621 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373306 5261 Brassicaceae View MSA
123834445 5264 Brassicales-Malvales View MSA
124348028 5266 SBM View MSA
124243102 5268 Malvidae View MSA
124063219 5270 Rosid View MSA
123740290 5271 Pentapetalae View MSA
122793260 5272 Eudicot View MSA
122048608 5273 Angiosperm View MSA
121311037 5274 Embryophyte View MSA
123348391 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain