Gene : Cagra.2238s0072 C. grandiflora v1.1
Defline:  (1 of 9) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  72
Name:  ? Cagra.2238s0072 Secondary Identifier:  ? PAC:28918248
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2238s0072 0.5kb upstream 0.5kb upstream 3211 true Scaffold2238: 233634-236844 Capsella grandiflora
Cagra.2238s0072 0.5kb upstream 0.5kb upstream 500 false Scaffold2238: 236345-236844 Capsella grandiflora
Cagra.2238s0072 0.5kb downstream 0.5kb downstream 3211 true Scaffold2238: 233134-236344 Capsella grandiflora
Cagra.2238s0072 0.5kb downstream 0.5kb downstream 500 false Scaffold2238: 233134-233633 Capsella grandiflora
Cagra.2238s0072 1.0kb upstream 1.0kb upstream 3711 true Scaffold2238: 233634-237344 Capsella grandiflora
Cagra.2238s0072 1.0kb upstream 1.0kb upstream 1000 false Scaffold2238: 236345-237344 Capsella grandiflora
Cagra.2238s0072 1.0kb downstream 1.0kb downstream 3711 true Scaffold2238: 232634-236344 Capsella grandiflora
Cagra.2238s0072 1.0kb downstream 1.0kb downstream 1000 false Scaffold2238: 232634-233633 Capsella grandiflora
Cagra.2238s0072 2.0kb upstream 2.0kb upstream 4711 true Scaffold2238: 233634-238344 Capsella grandiflora
Cagra.2238s0072 2.0kb upstream 2.0kb upstream 2000 false Scaffold2238: 236345-238344 Capsella grandiflora
Cagra.2238s0072 2.0kb downstream 2.0kb downstream 4711 true Scaffold2238: 231634-236344 Capsella grandiflora
Cagra.2238s0072 2.0kb downstream 2.0kb downstream 2000 false Scaffold2238: 231634-233633 Capsella grandiflora
Cagra.2238s0072 5.0kb upstream 5.0kb upstream 7711 true Scaffold2238: 233634-241344 Capsella grandiflora
Cagra.2238s0072 5.0kb upstream 5.0kb upstream 5000 false Scaffold2238: 236345-241344 Capsella grandiflora
Cagra.2238s0072 5.0kb downstream 5.0kb downstream 7711 true Scaffold2238: 228634-236344 Capsella grandiflora
Cagra.2238s0072 5.0kb downstream 5.0kb downstream 5000 false Scaffold2238: 228634-233633 Capsella grandiflora
Cagra.2238s0072 10.0kb upstream 10.0kb upstream 12711 true Scaffold2238: 233634-246344 Capsella grandiflora
Cagra.2238s0072 10.0kb upstream 10.0kb upstream 10000 false Scaffold2238: 236345-246344 Capsella grandiflora
Cagra.2238s0072 10.0kb downstream 10.0kb downstream 12711 true Scaffold2238: 223634-236344 Capsella grandiflora
Cagra.2238s0072 10.0kb downstream 10.0kb downstream 10000 false Scaffold2238: 223634-233633 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363716 5261 Brassicaceae View MSA
123838872 5264 Brassicales-Malvales View MSA
124337336 5266 SBM View MSA
124238154 5268 Malvidae View MSA
124068490 5270 Rosid View MSA
123736856 5271 Pentapetalae View MSA
122790484 5272 Eudicot View MSA
122044724 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain