Gene : Cagra.2238s0089 C. grandiflora v1.1
Defline:  (1 of 2) PTHR13780:SF51 - SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA-LIKE PV42A-RELATED Genomic Order:  89
Name:  ? Cagra.2238s0089 Secondary Identifier:  ? PAC:28918212
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2238s0089 0.5kb upstream 0.5kb upstream 1636 true Scaffold2238: 281598-283233 Capsella grandiflora
Cagra.2238s0089 0.5kb upstream 0.5kb upstream 500 false Scaffold2238: 282734-283233 Capsella grandiflora
Cagra.2238s0089 0.5kb downstream 0.5kb downstream 1636 true Scaffold2238: 281098-282733 Capsella grandiflora
Cagra.2238s0089 0.5kb downstream 0.5kb downstream 500 false Scaffold2238: 281098-281597 Capsella grandiflora
Cagra.2238s0089 1.0kb upstream 1.0kb upstream 2136 true Scaffold2238: 281598-283733 Capsella grandiflora
Cagra.2238s0089 1.0kb upstream 1.0kb upstream 1000 false Scaffold2238: 282734-283733 Capsella grandiflora
Cagra.2238s0089 1.0kb downstream 1.0kb downstream 2136 true Scaffold2238: 280598-282733 Capsella grandiflora
Cagra.2238s0089 1.0kb downstream 1.0kb downstream 1000 false Scaffold2238: 280598-281597 Capsella grandiflora
Cagra.2238s0089 2.0kb upstream 2.0kb upstream 3136 true Scaffold2238: 281598-284733 Capsella grandiflora
Cagra.2238s0089 2.0kb upstream 2.0kb upstream 2000 false Scaffold2238: 282734-284733 Capsella grandiflora
Cagra.2238s0089 2.0kb downstream 2.0kb downstream 3136 true Scaffold2238: 279598-282733 Capsella grandiflora
Cagra.2238s0089 2.0kb downstream 2.0kb downstream 2000 false Scaffold2238: 279598-281597 Capsella grandiflora
Cagra.2238s0089 5.0kb upstream 5.0kb upstream 6136 true Scaffold2238: 281598-287733 Capsella grandiflora
Cagra.2238s0089 5.0kb upstream 5.0kb upstream 5000 false Scaffold2238: 282734-287733 Capsella grandiflora
Cagra.2238s0089 5.0kb downstream 5.0kb downstream 6136 true Scaffold2238: 276598-282733 Capsella grandiflora
Cagra.2238s0089 5.0kb downstream 5.0kb downstream 5000 false Scaffold2238: 276598-281597 Capsella grandiflora
Cagra.2238s0089 10.0kb upstream 10.0kb upstream 11136 true Scaffold2238: 281598-292733 Capsella grandiflora
Cagra.2238s0089 10.0kb upstream 10.0kb upstream 10000 false Scaffold2238: 282734-292733 Capsella grandiflora
Cagra.2238s0089 10.0kb downstream 10.0kb downstream 11136 true Scaffold2238: 271598-282733 Capsella grandiflora
Cagra.2238s0089 10.0kb downstream 10.0kb downstream 10000 false Scaffold2238: 271598-281597 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375193 5261 Brassicaceae View MSA
123834102 5264 Brassicales-Malvales View MSA
124348504 5266 SBM View MSA
124243924 5268 Malvidae View MSA
124061084 5270 Rosid View MSA
123738875 5271 Pentapetalae View MSA
122797482 5272 Eudicot View MSA
122042639 5273 Angiosperm View MSA
121347644 5274 Embryophyte View MSA
123427907 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain