Gene : Cagra.2238s0102 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12707 - PINN Genomic Order:  102
Name:  ? Cagra.2238s0102 Secondary Identifier:  ? PAC:28918287
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2238s0102 0.5kb upstream 0.5kb upstream 3296 true Scaffold2238: 324229-327524 Capsella grandiflora
Cagra.2238s0102 0.5kb upstream 0.5kb upstream 500 false Scaffold2238: 324229-324728 Capsella grandiflora
Cagra.2238s0102 0.5kb downstream 0.5kb downstream 3296 true Scaffold2238: 324729-328024 Capsella grandiflora
Cagra.2238s0102 0.5kb downstream 0.5kb downstream 500 false Scaffold2238: 327525-328024 Capsella grandiflora
Cagra.2238s0102 1.0kb upstream 1.0kb upstream 3796 true Scaffold2238: 323729-327524 Capsella grandiflora
Cagra.2238s0102 1.0kb upstream 1.0kb upstream 1000 false Scaffold2238: 323729-324728 Capsella grandiflora
Cagra.2238s0102 1.0kb downstream 1.0kb downstream 3796 true Scaffold2238: 324729-328524 Capsella grandiflora
Cagra.2238s0102 1.0kb downstream 1.0kb downstream 1000 false Scaffold2238: 327525-328524 Capsella grandiflora
Cagra.2238s0102 2.0kb upstream 2.0kb upstream 4796 true Scaffold2238: 322729-327524 Capsella grandiflora
Cagra.2238s0102 2.0kb upstream 2.0kb upstream 2000 false Scaffold2238: 322729-324728 Capsella grandiflora
Cagra.2238s0102 2.0kb downstream 2.0kb downstream 4796 true Scaffold2238: 324729-329524 Capsella grandiflora
Cagra.2238s0102 2.0kb downstream 2.0kb downstream 2000 false Scaffold2238: 327525-329524 Capsella grandiflora
Cagra.2238s0102 5.0kb upstream 5.0kb upstream 7796 true Scaffold2238: 319729-327524 Capsella grandiflora
Cagra.2238s0102 5.0kb upstream 5.0kb upstream 5000 false Scaffold2238: 319729-324728 Capsella grandiflora
Cagra.2238s0102 5.0kb downstream 5.0kb downstream 7796 true Scaffold2238: 324729-332524 Capsella grandiflora
Cagra.2238s0102 5.0kb downstream 5.0kb downstream 5000 false Scaffold2238: 327525-332524 Capsella grandiflora
Cagra.2238s0102 10.0kb upstream 10.0kb upstream 12796 true Scaffold2238: 314729-327524 Capsella grandiflora
Cagra.2238s0102 10.0kb upstream 10.0kb upstream 10000 false Scaffold2238: 314729-324728 Capsella grandiflora
Cagra.2238s0102 10.0kb downstream 10.0kb downstream 12796 true Scaffold2238: 324729-337524 Capsella grandiflora
Cagra.2238s0102 10.0kb downstream 10.0kb downstream 10000 false Scaffold2238: 327525-337524 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363318 5261 Brassicaceae View MSA
123832772 5264 Brassicales-Malvales View MSA
124342581 5266 SBM View MSA
124239356 5268 Malvidae View MSA
124061315 5270 Rosid View MSA
123738009 5271 Pentapetalae View MSA
122786181 5272 Eudicot View MSA
122046264 5273 Angiosperm View MSA
121351481 5274 Embryophyte View MSA
123426416 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain