Gene : Cagra.2235s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23284 - PROLACTIN REGULATORY ELEMENT BINDING PROTEIN Genomic Order:  5
Name:  ? Cagra.2235s0005 Secondary Identifier:  ? PAC:28907695
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2235s0005 0.5kb upstream 0.5kb upstream 2983 true Scaffold2235: 23840-26822 Capsella grandiflora
Cagra.2235s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold2235: 26323-26822 Capsella grandiflora
Cagra.2235s0005 0.5kb downstream 0.5kb downstream 2983 true Scaffold2235: 23340-26322 Capsella grandiflora
Cagra.2235s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold2235: 23340-23839 Capsella grandiflora
Cagra.2235s0005 1.0kb upstream 1.0kb upstream 3483 true Scaffold2235: 23840-27322 Capsella grandiflora
Cagra.2235s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold2235: 26323-27322 Capsella grandiflora
Cagra.2235s0005 1.0kb downstream 1.0kb downstream 3483 true Scaffold2235: 22840-26322 Capsella grandiflora
Cagra.2235s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold2235: 22840-23839 Capsella grandiflora
Cagra.2235s0005 2.0kb upstream 2.0kb upstream 4483 true Scaffold2235: 23840-28322 Capsella grandiflora
Cagra.2235s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold2235: 26323-28322 Capsella grandiflora
Cagra.2235s0005 2.0kb downstream 2.0kb downstream 4483 true Scaffold2235: 21840-26322 Capsella grandiflora
Cagra.2235s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold2235: 21840-23839 Capsella grandiflora
Cagra.2235s0005 5.0kb upstream 5.0kb upstream 7483 true Scaffold2235: 23840-31322 Capsella grandiflora
Cagra.2235s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold2235: 26323-31322 Capsella grandiflora
Cagra.2235s0005 5.0kb downstream 5.0kb downstream 7483 true Scaffold2235: 18840-26322 Capsella grandiflora
Cagra.2235s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold2235: 18840-23839 Capsella grandiflora
Cagra.2235s0005 10.0kb upstream 10.0kb upstream 12483 true Scaffold2235: 23840-36322 Capsella grandiflora
Cagra.2235s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold2235: 26323-36322 Capsella grandiflora
Cagra.2235s0005 10.0kb downstream 10.0kb downstream 12483 true Scaffold2235: 13840-26322 Capsella grandiflora
Cagra.2235s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold2235: 13840-23839 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360939 5261 Brassicaceae View MSA
123831353 5264 Brassicales-Malvales View MSA
124344126 5266 SBM View MSA
124241727 5268 Malvidae View MSA
124066730 5270 Rosid View MSA
123739109 5271 Pentapetalae View MSA
122787428 5272 Eudicot View MSA
122046162 5273 Angiosperm View MSA
121350102 5274 Embryophyte View MSA
123428772 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain